RNA–Protein interactions for RNA: ENST00000530893.6

BRCA2-204, Transcript of BRCA2, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA2, Length 2,011 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2-204ENST00000530893 THSD1Q9NS62 852 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 TBCCD1Q9NVR7 557 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 AHSPQ9NZD4 102 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 RAPGEFL1Q9UHV5 662 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 WBP11Q9Y2W2 641 aaKnown RBP16.5■□□□□ 0.23
BRCA2-204ENST00000530893 PCDHGA10Q9Y5H3 936 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 PDE4DIPQ5VU43 2346 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 SLC22A1O15245 554 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 RGS10O43665 173 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 MMP20O60882 483 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 KRT75O95678 551 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 C6orf47O95873 294 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 RRM2P31350 389 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 FMO3P31513 532 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 PRIM2P49643 509 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 RPP38P78345 283 aaKnown RBP16.5■□□□□ 0.23
BRCA2-204ENST00000530893 SCARB2Q14108 478 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 CTF1Q16619 201 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 ZNF697Q5TEC3 545 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 PRSS48Q7RTY5 328 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 DSG4Q86SJ6 1040 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 PDZD3Q86UT5 571 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 NATD1Q8N6N6 113 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 ZNF540Q8NDQ6 660 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 HSPBAP1Q96EW2 488 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 FAM129BQ96TA1 746 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 OR52A5Q9H2C5 316 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 TMEM245Q9H330 911 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 OR51B5Q9H339 312 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 NECTIN3Q9NQS3 549 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 NDUFAF4Q9P032 175 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 ICKQ9UPZ9 632 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 LYVE1Q9Y5Y7 322 aa16.5■□□□□ 0.23
BRCA2-204ENST00000530893 TCF20Q9UGU0 1960 aaKnown RBP16.49■□□□□ 0.23
BRCA2-204ENST00000530893 ETFAP13804 333 aa16.49■□□□□ 0.23
BRCA2-204ENST00000530893 ZNF12P17014 697 aa16.49■□□□□ 0.23
BRCA2-204ENST00000530893 HSD17B2P37059 387 aa16.49■□□□□ 0.23
BRCA2-204ENST00000530893 BMXP51813 675 aa16.49■□□□□ 0.23
BRCA2-204ENST00000530893 MAPK10P53779 464 aa16.49■□□□□ 0.23
BRCA2-204ENST00000530893 TAS2R50P59544 299 aa16.49■□□□□ 0.23
BRCA2-204ENST00000530893 FPGSQ05932 587 aa16.49■□□□□ 0.23
BRCA2-204ENST00000530893 CAMK1Q14012 370 aa16.49■□□□□ 0.23
BRCA2-204ENST00000530893 NFE2L1Q14494 772 aa16.49■□□□□ 0.23
BRCA2-204ENST00000530893 ARHGAP19Q14CB8 494 aa16.49■□□□□ 0.23
BRCA2-204ENST00000530893 CYP2A13Q16696 494 aa16.49■□□□□ 0.23
BRCA2-204ENST00000530893 CRB2Q5IJ48 1285 aa16.49■□□□□ 0.23
BRCA2-204ENST00000530893 C11orf96Q7Z7L8 435 aa16.49■□□□□ 0.23
BRCA2-204ENST00000530893 DCUN1D3Q8IWE4 304 aa16.49■□□□□ 0.23
BRCA2-204ENST00000530893 PHF6Q8IWS0 365 aaKnown RBP eCLIP16.49■□□□□ 0.23
BRCA2-204ENST00000530893 SPPL2AQ8TCT8 520 aa16.49■□□□□ 0.23
BRCA2-204ENST00000530893 GIPC3Q8TF64 312 aa16.49■□□□□ 0.23
BRCA2-204ENST00000530893 RSPRY1Q96DX4 576 aa16.49■□□□□ 0.23
BRCA2-204ENST00000530893 ERVK-18Q9QC07 812 aa16.49■□□□□ 0.23
BRCA2-204ENST00000530893 SPASTQ9UBP0 616 aa16.49■□□□□ 0.23
BRCA2-204ENST00000530893 ASF1AQ9Y294 204 aa16.49■□□□□ 0.23
BRCA2-204ENST00000530893 TNFRSF11BO00300 401 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 SEMA3DO95025 777 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 RPN2P04844 631 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 HLA-EP13747 358 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 ANXA8P13928 327 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 DDX5P17844 614 aaKnown RBP16.48■□□□□ 0.23
BRCA2-204ENST00000530893 AQP1P29972 269 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 TMED1Q13445 227 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 COX20Q5RI15 118 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 PSRC1Q6PGN9 363 aaPredicted RBP16.48■□□□□ 0.23
BRCA2-204ENST00000530893 ADAMTSL4Q6UY14 1074 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 Q6ZNX1 250 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 FAM124AQ86V42 546 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 FAM129CQ86XR2 697 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 WDR48Q8TAF3 677 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 CXorf40AQ8TE69 158 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 COX14Q96I36 57 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 PLEKHA8Q96JA3 519 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 HDAC8Q9BY41 377 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 A0A1W2PRB8 838 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 C1QTNF3-AMACRE9PGA6 284 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 FOXD2O60548 495 aaPredicted RBP16.48■□□□□ 0.23
BRCA2-204ENST00000530893 FAM20BO75063 409 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 KLK1P06870 262 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 ERGP11308 486 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 CXCR2P25025 360 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 CD6P30203 668 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 CHI3L1P36222 383 aaPredicted RBP16.48■□□□□ 0.23
BRCA2-204ENST00000530893 ST13P50502 369 aaKnown RBP16.48■□□□□ 0.23
BRCA2-204ENST00000530893 ZNF234Q14588 700 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 TMEM240Q5SV17 173 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 MLIPQ5VWP3 458 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 ARMC5Q96C12 935 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 ZNF300Q96RE9 604 aaPredicted RBP16.48■□□□□ 0.23
BRCA2-204ENST00000530893 B3GNT3Q9Y2A9 372 aa16.48■□□□□ 0.23
BRCA2-204ENST00000530893 LINC01553A4QN01 128 aa16.47■□□□□ 0.23
BRCA2-204ENST00000530893 KLHL18O94889 574 aa16.47■□□□□ 0.23
BRCA2-204ENST00000530893 GBAP04062 536 aa16.47■□□□□ 0.23
BRCA2-204ENST00000530893 SERPINB1P30740 379 aa16.47■□□□□ 0.23
BRCA2-204ENST00000530893 VIPR2P41587 438 aa16.47■□□□□ 0.23
BRCA2-204ENST00000530893 SLC6A11P48066 632 aa16.47■□□□□ 0.23
BRCA2-204ENST00000530893 CDK6Q00534 326 aa16.47■□□□□ 0.23
BRCA2-204ENST00000530893 MC1RQ01726 317 aa16.47■□□□□ 0.23
BRCA2-204ENST00000530893 TEKQ02763 1124 aa16.47■□□□□ 0.23
BRCA2-204ENST00000530893 EEF1A2Q05639 463 aaKnown RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms