RNA–Protein interactions for RNA: ENST00000529545.1

VPS11-203, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS11, Length 576 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-203ENST00000529545 ZNF227Q86WZ6 799 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 PDSS2Q86YH6 399 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 ZZZ3Q8IYH5 903 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 SYCE1Q8N0S2 351 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 RPRMLQ8N4K4 120 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 TBC1D19Q8N5T2 526 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 KCT2Q8NC54 265 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 ACRBPQ8NEB7 543 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 OR52N2Q8NGI0 321 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 LPGAT1Q92604 370 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 TM4SF19Q96DZ7 209 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 LRRC46Q96FV0 321 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 GPATCH1Q9BRR8 931 aaKnown RBP8.4□□□□□ -1.06
VPS11-203ENST00000529545 FRMD8P1Q9BZ68 369 aaPredicted RBP8.4□□□□□ -1.06
VPS11-203ENST00000529545 CCDC68Q9H2F9 335 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 PAK5Q9P286 719 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 FBXW2Q9UKT8 454 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 PLEKHA6Q9Y2H5 1048 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 L3MBTL1Q9Y468 752 aa8.4□□□□□ -1.06
VPS11-203ENST00000529545 ACANP16112 2415 aa8.4□□□□□ -1.07
VPS11-203ENST00000529545 FEZF1A0PJY2 475 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 OR14I1A6ND48 311 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 A8MUA0 341 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 GOLGA8KD6RF30 607 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 GOLGA8TH3BQL2 631 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 PROM1O43490 865 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 CHST10O43529 356 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 SERPIND1P05546 499 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 MPC1LP0DKB6 136 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 ENO3P13929 434 aaPredicted RBP8.39□□□□□ -1.07
VPS11-203ENST00000529545 ALOX12P18054 663 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 PAMP19021 973 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 OGNP20774 298 aaKnown RBP8.39□□□□□ -1.07
VPS11-203ENST00000529545 IMPA1P29218 277 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 COILP38432 576 aaPredicted RBP8.39□□□□□ -1.07
VPS11-203ENST00000529545 SKIV2L2P42285 1042 aaKnown RBP8.39□□□□□ -1.07
VPS11-203ENST00000529545 CLCN2P51788 898 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 ADAM8P78325 824 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 CRADDP78560 199 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 RGS1Q08116 209 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 RPS6KA1Q15418 735 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 TYSND1Q2T9J0 566 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 SLC25A35Q3KQZ1 300 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 EMC4Q5J8M3 183 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 FBXW10Q5XX13 1052 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 ZNF585AQ6P3V2 769 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 B3GNT6Q6ZMB0 384 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 QSOX2Q6ZRP7 698 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 UBE2R2Q712K3 238 aaPredicted RBP8.39□□□□□ -1.07
VPS11-203ENST00000529545 SLC22A16Q86VW1 577 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 LRRC56Q8IYG6 542 aaPredicted RBP8.39□□□□□ -1.07
VPS11-203ENST00000529545 SHISA5Q8N114 240 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 ARMC10Q8N2F6 343 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 PRELID2Q8N945 189 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 MFSD9Q8NBP5 474 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 OR5T3Q8NGG3 340 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 OR5M9Q8NGP3 310 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 ASB11Q8WXH4 323 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 ATG4AQ8WYN0 398 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 ALKBH8Q96BT7 664 aaKnown RBP8.39□□□□□ -1.07
VPS11-203ENST00000529545 PWWP2AQ96N64 755 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 SMC6Q96SB8 1091 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 CCDC77Q9BR77 488 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 TTYH2Q9BSA4 534 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 SARGQ9BW04 601 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 LIME1Q9H400 295 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 DLL4Q9NR61 685 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 RASSF1Q9NS23 344 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 PNPLA3Q9NST1 481 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 ZNF358Q9NW07 568 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 KLHL42Q9P2K6 505 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 GALPQ9UBC7 116 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 RPH3AQ9Y2J0 694 aaPredicted RBP8.39□□□□□ -1.07
VPS11-203ENST00000529545 EPN1Q9Y6I3 576 aaPredicted RBP8.39□□□□□ -1.07
VPS11-203ENST00000529545 FBN3Q75N90 2809 aa8.39□□□□□ -1.07
VPS11-203ENST00000529545 TRBV11-1A0A0K0K1C0 115 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 TCRBV7S2A1N4TA0A589 114 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 GRID2IPA4D2P6 1211 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 CTAGE9A4FU28 777 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 FAM181BA6NEQ2 426 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 A8MVJ9 347 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 BTNL10A8MVZ5 291 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 GFYI3L273 518 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 NDUFS4O43181 175 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 LIASO43766 372 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 LCMT2O60294 686 aaKnown RBP8.38□□□□□ -1.07
VPS11-203ENST00000529545 GALR3O60755 368 aaPredicted RBP8.38□□□□□ -1.07
VPS11-203ENST00000529545 ITGA10O75578 1167 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 GLI4P10075 376 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 CCND1P24385 295 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 ADSLP30566 484 aaPredicted RBP8.38□□□□□ -1.07
VPS11-203ENST00000529545 UQCRC1P31930 480 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 GMPRP36959 345 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 SSR4P51571 173 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 TBPL1P62380 186 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 TBX2Q13207 712 aaPredicted RBP8.38□□□□□ -1.07
VPS11-203ENST00000529545 PWP1Q13610 501 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 OASLQ15646 514 aaKnown RBP8.38□□□□□ -1.07
VPS11-203ENST00000529545 DEFB134Q4QY38 66 aa8.38□□□□□ -1.07
VPS11-203ENST00000529545 CES3Q6UWW8 571 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms