RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 GRM7Q14831 915 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 SLC9A5Q14940 896 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 NAA25Q14CX7 972 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 CDSNQ15517 529 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 CEBPEQ15744 281 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 ZSCAN26Q16670 478 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 PRTGQ2VWP7 1150 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 NKAIN1Q4KMZ8 207 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 YOD1Q5VVQ6 348 aaPredicted RBP8.03□□□□□ -1.12
SSBP3-212ENST00000528930 MLIPQ5VWP3 458 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 MTFR2Q6P444 385 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 AGTRAPQ6RW13 159 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 SBSNQ6UWP8 590 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 Q6ZS92 163 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 CAPN12Q6ZSI9 719 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 C3orf62Q6ZUJ4 267 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 COX15Q7KZN9 410 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 CUZD1Q86UP6 607 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.03□□□□□ -1.12
SSBP3-212ENST00000528930 ALPK1Q96QP1 1244 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 OR2A5Q96R48 311 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 ZFYVE21Q9BQ24 234 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 SGPP1Q9BX95 441 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 RAB17Q9H0T7 212 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 ATG10Q9H0Y0 220 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 RHOJQ9H4E5 214 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 PRM3Q9NNZ6 103 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 BRD7Q9NPI1 651 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 CUTCQ9NTM9 273 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 TXLNGQ9NUQ3 528 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 IRAK4Q9NWZ3 460 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 NSMCE4AQ9NXX6 385 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 SH2B3Q9UQQ2 575 aa8.03□□□□□ -1.12
SSBP3-212ENST00000528930 MTO1Q9Y2Z2 717 aaKnown RBP8.03□□□□□ -1.12
SSBP3-212ENST00000528930 A0A1B0GX78 115 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 HYKKA2RU49 373 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 C9J4A7 227 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 H7BY64 318 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 MASP2O00187 686 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 CLGNO14967 610 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 CCNDBP1O95273 360 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 LY6G6DO95868 133 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 EIF2S1P05198 315 aaKnown RBP8.02□□□□□ -1.13
SSBP3-212ENST00000528930 UMODP07911 640 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 GSTA2P09210 222 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 EZRP15311 586 aaKnown RBP8.02□□□□□ -1.13
SSBP3-212ENST00000528930 NPPBP16860 134 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 MAGEA4P43358 317 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 OR1D4P47884 311 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 NAE1Q13564 534 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 SSPNQ14714 243 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 PPP1R3AQ16821 1122 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 WHAMMP3Q1A5X7 153 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 ERCC6LQ2NKX8 1250 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 FAM214AQ32MH5 1076 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 TUBB8Q3ZCM7 444 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 THEMIS2Q5TEJ8 643 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 VWA5B1Q5TIE3 1220 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 OVCH1Q7RTY7 1134 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 PLD3Q8IV08 490 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 ARHGEF39Q8N4T4 335 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 MMGT1Q8N4V1 131 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 TTC29Q8NA56 475 aaPredicted RBP8.02□□□□□ -1.13
SSBP3-212ENST00000528930 OR2Y1Q8NGV0 311 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 GRHL3Q8TE85 626 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 ANKRD49Q8WVL7 239 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 FAR1Q8WVX9 515 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 VPS39Q96JC1 886 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 C10orf90Q96M02 699 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 PRAP1Q96NZ9 151 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 C17orf62Q9BQA9 187 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 SLC26A1Q9H2B4 701 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 CCDC177Q9NQR7 707 aaPredicted RBP8.02□□□□□ -1.13
SSBP3-212ENST00000528930 ZDHHC18Q9NUE0 388 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 ABCF3Q9NUQ8 709 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 TMEM184CQ9NVA4 438 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 IFT80Q9P2H3 777 aaPredicted RBP8.02□□□□□ -1.13
SSBP3-212ENST00000528930 NDOR1Q9UHB4 597 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 DMGDHQ9UI17 866 aaKnown RBP8.02□□□□□ -1.13
SSBP3-212ENST00000528930 RAB21Q9UL25 225 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 NOVA2Q9UNW9 492 aaKnown RBP8.02□□□□□ -1.13
SSBP3-212ENST00000528930 PTRH2Q9Y3E5 179 aaKnown RBP8.02□□□□□ -1.13
SSBP3-212ENST00000528930 MEGF8Q7Z7M0 2845 aa8.02□□□□□ -1.13
SSBP3-212ENST00000528930 KCNE1BA0A087WTH5 132 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 VSTM2BA6NLU5 285 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 CDC7O00311 574 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 HAT1O14929 419 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 P2RX6O15547 441 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 LCMT2O60294 686 aaKnown RBP8.01□□□□□ -1.13
SSBP3-212ENST00000528930 CD63P08962 238 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 ENO2P09104 434 aaPredicted RBP8.01□□□□□ -1.13
SSBP3-212ENST00000528930 HIST1H2AGP0C0S8 130 aaPredicted RBP8.01□□□□□ -1.13
SSBP3-212ENST00000528930 HIST1H2ADP20671 130 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 SAT1P21673 171 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 HRH2P25021 359 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 GLRBP48167 497 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 AP1S2P56377 157 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 ADORA2A-AS1P86434 159 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 POU4F1Q01851 419 aa8.01□□□□□ -1.13
SSBP3-212ENST00000528930 GTF3C1Q12789 2109 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms