RNA–Protein interactions for RNA: ENST00000528877.5

ITGB1-218, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-218ENST00000528877 KIRREL2Q6UWL6 708 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 MBOAT1Q6ZNC8 495 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 Q6ZS92 163 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 MAATS1Q7Z4T9 603 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 ATG4DQ86TL0 474 aaPredicted RBP6.69□□□□□ -1.34
ITGB1-218ENST00000528877 C17orf64Q86WR6 236 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 TMEM151BQ8IW70 566 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 ZC3H7AQ8IWR0 971 aaKnown RBP6.69□□□□□ -1.34
ITGB1-218ENST00000528877 PALM2Q8IXS6 379 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 KLHDC8AQ8IYD2 350 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 GPATCH11Q8N954 259 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 OR4K1Q8NGD4 311 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 PIWIL2Q8TC59 973 aaKnown RBP6.69□□□□□ -1.34
ITGB1-218ENST00000528877 CPT1CQ8TCG5 803 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 PPP4R1Q8TF05 950 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 ATL1Q8WXF7 558 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 MIEF2Q96C03 454 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 CFAP36Q96G28 342 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 CCDC120Q96HB5 630 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 PWWP2AQ96N64 755 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 KRT12Q99456 494 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 ERP44Q9BS26 406 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 HAUS8Q9BT25 410 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 CRB3Q9BUF7 120 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 LHPPQ9H008 270 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 RHOJQ9H4E5 214 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 GRHL1Q9NZI5 618 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 SH2B3Q9UQQ2 575 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 PLAAQ9Y263 795 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 B3GNT3Q9Y2A9 372 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 VWA7Q9Y334 891 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.69□□□□□ -1.348e-10■□□□□ 8
ITGB1-218ENST00000528877 MAU2Q9Y6X3 613 aa6.69□□□□□ -1.34
ITGB1-218ENST00000528877 SHANK1Q9Y566 2161 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 TRBC2A0A5B9 178 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 PABPN1LA6NDY0 278 aaKnown RBP6.68□□□□□ -1.34
ITGB1-218ENST00000528877 IDSB3KWA1 339 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 H7BY64 318 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 MAP2K7O14733 419 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 RAD51CO43502 376 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 EIF2S1P05198 315 aaKnown RBP6.68□□□□□ -1.34
ITGB1-218ENST00000528877 GSTA2P09210 222 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 HIST1H2AGP0C0S8 130 aaPredicted RBP6.68□□□□□ -1.34
ITGB1-218ENST00000528877 CDH1P12830 882 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 NPPBP16860 134 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 HIST1H2ADP20671 130 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 BCL6P41182 706 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 HNMTP50135 292 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 MLLT10P55197 1068 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 CAV1Q03135 178 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 CALCOCO2Q13137 446 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 ZKSCAN8Q15776 578 aaPredicted RBP6.68□□□□□ -1.34
ITGB1-218ENST00000528877 IGFBP7Q16270 282 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 NDUFA9Q16795 377 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 CRB2Q5IJ48 1285 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 CDKL4Q5MAI5 379 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 THEMIS2Q5TEJ8 643 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 B3GNTL1Q67FW5 361 aaPredicted RBP6.68□□□□□ -1.34
ITGB1-218ENST00000528877 CAPN13Q6MZZ7 669 aaPredicted RBP6.68□□□□□ -1.34
ITGB1-218ENST00000528877 NIPAL1Q6NVV3 410 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 TMEM205Q6UW68 189 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 TMEM207Q6UWW9 146 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 BNC2Q6ZN30 1099 aaPredicted RBP6.68□□□□□ -1.34
ITGB1-218ENST00000528877 ADCK2Q7Z695 626 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 ADAMTSL2Q86TH1 951 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 LURAP1LQ8IV03 231 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 ZBED8Q8IZ13 594 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 IQCKQ8N0W5 287 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 AFAP1L2Q8N4X5 818 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 NKAPQ8N5F7 415 aaKnown RBP6.68□□□□□ -1.34
ITGB1-218ENST00000528877 METTL27Q8N6F8 245 aaPredicted RBP6.68□□□□□ -1.34
ITGB1-218ENST00000528877 MFSD9Q8NBP5 474 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 CAMKVQ8NCB2 501 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 VPS39Q96JC1 886 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 SEC16BQ96JE7 1060 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 HIST1H2AHQ96KK5 128 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 PRAP1Q96NZ9 151 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 OR4K3Q96R72 315 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 OR1F2PQ96R84 312 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 HIST1H2AJQ99878 128 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 WDR77Q9BQA1 342 aaPredicted RBP6.68□□□□□ -1.34
ITGB1-218ENST00000528877 H2AFJQ9BTM1 129 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 ZNF700Q9H0M5 742 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 PELI2Q9HAT8 420 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 PPANQ9NQ55 473 aaKnown RBP6.68□□□□□ -1.34
ITGB1-218ENST00000528877 RIC8BQ9NVN3 520 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 ARL15Q9NXU5 204 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 COPG2Q9UBF2 871 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 TRPC4Q9UBN4 977 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 C3orf18Q9UK00 162 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 IKZF3Q9UKT9 509 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 MRPS2Q9Y399 296 aaKnown RBP6.68□□□□□ -1.34
ITGB1-218ENST00000528877 OARD1Q9Y530 152 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 SLC22A7Q9Y694 548 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 SPTBN1Q01082 2364 aaKnown RBP6.68□□□□□ -1.34
ITGB1-218ENST00000528877 CENPEQ02224 2701 aa6.68□□□□□ -1.34
ITGB1-218ENST00000528877 MDC1Q14676 2089 aaKnown RBP6.67□□□□□ -1.34
ITGB1-218ENST00000528877 IGHV1-45A0A0A0MS14 117 aa6.67□□□□□ -1.34
ITGB1-218ENST00000528877 A0A0A6YYC8 382 aaPredicted RBP6.67□□□□□ -1.34
ITGB1-218ENST00000528877 TCRBV9S1A1TA0A576 114 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms