RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	PITHD1	Q9GZP4	211 aa	Predicted RBP	11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	ILKAP	Q9H0C8	392 aa	Predicted RBP	11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	EPS8L2	Q9H6S3	715 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	NT5DC2	Q9H857	520 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	PTGFRN	Q9P2B2	879 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	PCDHGA10	Q9Y5H3	936 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	HEATR5B	Q9P2D3	2071 aa		11.08	□□□□□ -0.64
PSMC3-205	ENST00000528362	LRIT2	A6NDA9	550 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	MAGEB17	A8MXT2	336 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	CLGN	O14967	610 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	INHBA	P08476	426 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	GSTM2	P28161	218 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	MAGEA12	P43365	314 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	GLRB	P48167	497 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	STXBP1	P61764	594 aa	Known RBP	11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	BTN3A2	P78410	334 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	IRF8	Q02556	426 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	E2F2	Q14209	437 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	NSDHL	Q15738	373 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	TBCC	Q15814	346 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	FAM83E	Q2M2I3	478 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	ADPRM	Q3LIE5	342 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	CRB2	Q5IJ48	1285 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	B3GNTL1	Q67FW5	361 aa	Predicted RBP	11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	PLAG1	Q6DJT9	500 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	ATCAY	Q86WG3	371 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	IQCK	Q8N0W5	287 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	EFCAB3	Q8N7B9	438 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	GALNT11	Q8NCW6	608 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	LRRN4CL	Q8ND94	238 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	PLPP5	Q8NEB5	264 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	RHEBL1	Q8TAI7	183 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	UHMK1	Q8TAS1	419 aa	Known RBP	11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	CCT6B	Q92526	530 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	SNRNP40	Q96DI7	357 aa	Known RBP	11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	MS4A6E	Q96DS6	147 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	C19orf60	Q96EN9	201 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	SEC16B	Q96JE7	1060 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	LMF1	Q96S06	567 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	EFCAB11	Q9BUY7	163 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	CLK4	Q9HAZ1	481 aa	Known RBP	11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	C19orf25	Q9UFG5	118 aa	Predicted RBP	11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	ZNF490	Q9ULM2	529 aa	Predicted RBP	11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	NFU1	Q9UMS0	254 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362	FLNC	Q14315	2725 aa		11.07	□□□□□ -0.64
PSMC3-205	ENST00000528362		A0A0G2JN53	185 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	CCDC189	A1A4V9	331 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	CLEC18A	A5D8T8	446 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	SYCE1L	A8MT33	242 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	FAM227A	F5H4B4	570 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362		K7EPI3	171 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	ERI3	O43414	337 aa	Known RBP	11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	KLK8	O60259	260 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	B4GALT2	O60909	372 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	VPS4B	O75351	444 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	CLEC3A	O75596	197 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	KLHL2	O95198	593 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	RNH1	P13489	461 aa	Known RBP	11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	ICAM2	P13598	275 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	GNLY	P22749	145 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	JAK1	P23458	1154 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	TYK2	P29597	1187 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	CASP2	P42575	452 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	SRSF1	Q07955	248 aa	Known RBP eCLIP	11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	PCDH1	Q08174	1060 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	CHIT1	Q13231	466 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	SETDB1	Q15047	1291 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	ACAP2	Q15057	778 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	BTBD16	Q32M84	506 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	SFT2D3	Q587I9	215 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	PAPD4	Q6PIY7	484 aa	Known RBP	11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	CLEC18B	Q6UXF7	455 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	CA13	Q8N1Q1	262 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	PLD6	Q8N2A8	252 aa	Known RBP	11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	CISD2	Q8N5K1	135 aa	Known RBP	11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	CLEC18C	Q8NCF0	446 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	DNAJB14	Q8TBM8	379 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	DCAKD	Q8WVC6	231 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	CNDP1	Q96KN2	507 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	QRFPR	Q96P65	431 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	VPS11	Q9H270	941 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	RHBG	Q9H310	441 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	OPTC	Q9UBM4	332 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	VPS4A	Q9UN37	437 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	NTNG1	Q9Y2I2	539 aa		11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	TNRC6A	Q8NDV7	1962 aa	Known RBP	11.06	□□□□□ -0.64
PSMC3-205	ENST00000528362	PRRC2C	Q9Y520	2896 aa	Known RBP	11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362		A0A087WUV0	522 aa	Predicted RBP	11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	IGKV3D-11	A0A0A0MRZ8	115 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	ANKDD1B	A6NHY2	528 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	LRRC14B	A6NHZ5	514 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	POC1B-GALNT4	F8VUJ3	575 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	WFS1	O76024	890 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	ABHD2	P08910	425 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	RHOXF2B	P0C7M4	288 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	GFAP	P14136	432 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	SERPINB9	P50453	376 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	PLA2G16	P53816	162 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	OR4D2	P58180	307 aa		11.05	□□□□□ -0.64
PSMC3-205	ENST00000528362	AP2B1	P63010	937 aa		11.05	□□□□□ -0.64

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms