RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 SKILP12757 684 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 CCND2P30279 289 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 CDH11P55287 796 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 CDH13P55290 713 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 GABPB1Q06547 395 aaPredicted RBP5.33□□□□□ -1.56
PCF11-202ENST00000528336 RRS1Q15050 365 aaKnown RBP5.33□□□□□ -1.56
PCF11-202ENST00000528336 TEX35Q5T0J7 233 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 TMEM211Q6ICI0 200 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 CORO6Q6QEF8 472 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 RBMS3Q6XE24 437 aaKnown RBP5.33□□□□□ -1.56
PCF11-202ENST00000528336 C1orf186Q6ZWK4 172 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 KCTD9Q7L273 389 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 TRPT1Q86TN4 253 aaKnown RBP5.33□□□□□ -1.56
PCF11-202ENST00000528336 ADIPOR2Q86V24 386 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 DNAJC22Q8N4W6 341 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 SLC4A11Q8NBS3 891 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 OR2T12Q8NG77 320 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 OR7G3Q8NG95 312 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 AGR3Q8TD06 166 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 TCEANC2Q96MN5 208 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 PARK7Q99497 189 aaKnown RBP5.33□□□□□ -1.56
PCF11-202ENST00000528336 RHNO1Q9BSD3 238 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 MTMR12Q9C0I1 747 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 TMEM206Q9H813 350 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 VCPKMTQ9H867 229 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 COQ10BQ9H8M1 238 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 TBC1D17Q9HA65 648 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 ACKR4Q9NPB9 350 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 HOMER3Q9NSC5 361 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 TMOD3Q9NYL9 352 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 SEPT10Q9P0V9 454 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 TEKT2Q9UIF3 430 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 PIK3C2AO00443 1686 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 LRP6O75581 1613 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 SLIT3O75094 1523 aa5.33□□□□□ -1.56
PCF11-202ENST00000528336 OVOS2A0A0J9YW53 1432 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 OVOS2Q6IE36 1432 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 CPDO75976 1380 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 WDR19Q8NEZ3 1342 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 GOLGA6L7A0A1B0GV03 622 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 SPOPO43791 374 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 CYTIPO60759 359 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 MTRF1O75570 445 aaKnown RBP5.32□□□□□ -1.56
PCF11-202ENST00000528336 TSHBP01222 138 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 GBAP04062 536 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 ADRA2CP18825 462 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 GLRA2P23416 452 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 CDKN1AP38936 164 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 NAGLUP54802 743 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 NME5P56597 212 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 CDK3Q00526 305 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 PNRC1Q12796 327 aaPredicted RBP5.32□□□□□ -1.56
PCF11-202ENST00000528336 SGCBQ16585 318 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 ZC2HC1CQ53FD0 456 aaPredicted RBP5.32□□□□□ -1.56
PCF11-202ENST00000528336 MDH1BQ5I0G3 518 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 CAMKMTQ7Z624 323 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 PLD3Q8IV08 490 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 ARL14Q8N4G2 192 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 CNBD1Q8NA66 436 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 OR5M8Q8NGP6 311 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 NR4A3Q92570 626 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 PIWIL1Q96J94 861 aaKnown RBP5.32□□□□□ -1.56
PCF11-202ENST00000528336 SAMD8Q96LT4 415 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 OLFM1Q99784 485 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 EGFL8Q99944 293 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 PKP2Q99959 881 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 TEX13AQ9BXU3 409 aaPredicted RBP5.32□□□□□ -1.56
PCF11-202ENST00000528336 NACAP1Q9BZK3 213 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 STMN4Q9H169 189 aaPredicted RBP5.32□□□□□ -1.56
PCF11-202ENST00000528336 RIBC2Q9H4K1 309 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 EHD1Q9H4M9 534 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 FANCEQ9HB96 536 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 SYTL2Q9HCH5 934 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 TUFT1Q9NNX1 390 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 CENPMQ9NSP4 180 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 ECHDC1Q9NTX5 307 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 DNAJC17Q9NVM6 304 aaKnown RBP5.32□□□□□ -1.56
PCF11-202ENST00000528336 GDAP2Q9NXN4 497 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 SLC7A7Q9UM01 511 aa5.32□□□□□ -1.56
PCF11-202ENST00000528336 NPC1L1Q9UHC9 1359 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 USP54Q70EL1 1684 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 TTC41PQ6P2S7 1318 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 CLIC2O15247 247 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 AKR7A3O95154 331 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 PRAMEF12O95522 483 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 PTBP3O95758 552 aaKnown RBP5.31□□□□□ -1.56
PCF11-202ENST00000528336 TGFAP01135 160 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 KRT6BP04259 564 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 ABHD2P08910 425 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 FAM86B2P0C5J1 330 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 NCF1P14598 390 aaPredicted RBP5.31□□□□□ -1.56
PCF11-202ENST00000528336 EPORP19235 508 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 JAK1P23458 1154 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 MT3P25713 68 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 PTGER3P43115 390 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 KRT6CP48668 564 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 ST8SIA6P61647 398 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 IL24Q13007 206 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 LETM2Q2VYF4 491 aa5.31□□□□□ -1.56
PCF11-202ENST00000528336 CFAP221Q4G0U5 840 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms