RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 ZNF840PA6NDX5 716 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 H7C4K7 107 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 C8AP07357 584 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 POU1F1P28069 291 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 CCR7P32248 378 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 NSG1P42857 185 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 SLC15A1P46059 708 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 WNT3P56703 355 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 CDH18Q13634 790 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 TSTQ16762 297 aaKnown RBP12.03□□□□□ -0.48
CAPN1-208ENST00000527323 AGAP6Q5VW22 663 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 SLC8B1Q6J4K2 584 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 MSANTD1Q6ZTZ1 278 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 TSPAN33Q86UF1 283 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 FAM124AQ86V42 546 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 NAGSQ8N159 534 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 DEPDC4Q8N2C3 294 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 PGBD3Q8N328 593 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 AGAP4Q96P64 663 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 GABARAPL3Q9BY60 117 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 ZDHHC4Q9NPG8 344 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 PLCXD1Q9NUJ7 323 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 CCDC59Q9P031 241 aaKnown RBP12.03□□□□□ -0.48
CAPN1-208ENST00000527323 INSL6Q9Y581 213 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 PTPRSQ13332 1948 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 POM121CA8CG34 1229 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 ADAMDEC1O15204 470 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 YY2O15391 372 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 ZNF16P17020 682 aaPredicted RBP12.03□□□□□ -0.48
CAPN1-208ENST00000527323 CSKP41240 450 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 AP1S1P61966 158 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 OLR1P78380 273 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 ELAVL2Q12926 359 aaKnown RBP12.03□□□□□ -0.48
CAPN1-208ENST00000527323 MTAPQ13126 283 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 CAMK1Q14012 370 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 VEZF1Q14119 521 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 ZXDCQ2QGD7 858 aaPredicted RBP12.03□□□□□ -0.48
CAPN1-208ENST00000527323 CPTPQ5TA50 214 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 LGI4Q8N135 537 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 IL17RDQ8NFM7 739 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 GTPBP3Q969Y2 492 aaKnown RBP12.03□□□□□ -0.48
CAPN1-208ENST00000527323 PLD4Q96BZ4 506 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 TMEM175Q9BSA9 504 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 CCM2Q9BSQ5 444 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 FAM120CQ9NX05 1096 aaKnown RBP12.03□□□□□ -0.48
CAPN1-208ENST00000527323 TRPM5Q9NZQ8 1165 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 VPS29Q9UBQ0 182 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 PCDHGA3Q9Y5H0 932 aa12.03□□□□□ -0.48
CAPN1-208ENST00000527323 NOTCH4Q99466 2003 aa12.02□□□□□ -0.48
CAPN1-208ENST00000527323 A8MV72 311 aaPredicted RBP12.02□□□□□ -0.48
CAPN1-208ENST00000527323 SMAD6O43541 496 aaKnown RBP12.02□□□□□ -0.48
CAPN1-208ENST00000527323 AOAHP28039 575 aa12.02□□□□□ -0.48
CAPN1-208ENST00000527323 DAB2P98082 770 aa12.02□□□□□ -0.48
CAPN1-208ENST00000527323 GPR33Q49SQ1 333 aa12.02□□□□□ -0.48
CAPN1-208ENST00000527323 BCL7AQ4VC05 210 aa12.02□□□□□ -0.48
CAPN1-208ENST00000527323 XKR6Q5GH73 641 aa12.02□□□□□ -0.48
CAPN1-208ENST00000527323 GAREM2Q75VX8 874 aa12.02□□□□□ -0.48
CAPN1-208ENST00000527323 SYNPOQ8N3V7 929 aa12.02□□□□□ -0.48
CAPN1-208ENST00000527323 C11orf65Q8NCR3 313 aa12.02□□□□□ -0.48
CAPN1-208ENST00000527323 GPR26Q8NDV2 337 aa12.02□□□□□ -0.48
CAPN1-208ENST00000527323 PIK3R3Q92569 461 aa12.02□□□□□ -0.48
CAPN1-208ENST00000527323 DMRTB1Q96MA1 342 aa12.02□□□□□ -0.48
CAPN1-208ENST00000527323 NIPSNAP1Q9BPW8 284 aa12.02□□□□□ -0.48
CAPN1-208ENST00000527323 CNPPD1Q9BV87 410 aa12.02□□□□□ -0.48
CAPN1-208ENST00000527323 YBX2Q9Y2T7 364 aaKnown RBP12.02□□□□□ -0.48
CAPN1-208ENST00000527323 N6AMT1Q9Y5N5 214 aa12.02□□□□□ -0.48
CAPN1-208ENST00000527323 INSL5Q9Y5Q6 135 aa12.02□□□□□ -0.48
CAPN1-208ENST00000527323 KCNE1BA0A087WTH5 132 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 ANTXRLA6NF34 631 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 PLK4O00444 970 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 PRAMEF4O60810 478 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 SCN2BO60939 215 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 ANXA8P13928 327 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 PTPN2P17706 415 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 LAG3P18627 525 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 DGKEP52429 567 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 PRAMEF9Q5VWM5 478 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 ZNF544Q6NX49 715 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 UBE2Q1Q7Z7E8 422 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 B3GNT7Q8NFL0 401 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 CRELD1Q96HD1 420 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 OR5M11Q96RB7 305 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 MGLLQ99685 303 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 SLC30A2Q9BRI3 323 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 ZNF226Q9NYT6 803 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 NDUFAF4Q9P032 175 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 OR56A5P0C7T3 313 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 CBSLP0DN79 551 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 CBSP35520 551 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 SMAD3P84022 425 aaKnown RBP12.02□□□□□ -0.49
CAPN1-208ENST00000527323 RGNQ15493 299 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 EXOC3L2Q2M3D2 409 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 HKDC1Q2TB90 917 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 IQCCQ4KMZ1 466 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 ARMC4Q5T2S8 1044 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 TMEM150AQ86TG1 271 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 L3MBTL4Q8NA19 623 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 GPR156Q8NFN8 814 aa12.02□□□□□ -0.49
CAPN1-208ENST00000527323 NXF2Q9GZY0 626 aaKnown RBP12.02□□□□□ -0.49
CAPN1-208ENST00000527323 POFUT2Q9Y2G5 429 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms