RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 EMC2Q15006 297 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 ZBTB6Q15916 424 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 ZNF239Q16600 458 aaKnown RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 ISXQ2M1V0 245 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 ADCK5Q3MIX3 580 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 TTC31Q49AM3 519 aaPredicted RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 KRTCAP3Q53RY4 240 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 ZRANB3Q5FWF4 1079 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 ATG16L1Q676U5 607 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 ARMCX5Q6P1M9 558 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 CPLX2Q6PUV4 134 aaKnown RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 PRSS55Q6UWB4 352 aaPredicted RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 PLXDC2Q6UX71 529 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 ZNF704Q6ZNC4 412 aaPredicted RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 PIWIL4Q7Z3Z4 852 aaKnown RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 TRIM69Q86WT6 500 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 PLA2G4DQ86XP0 818 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 ZBTB8OSQ8IWT0 167 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 EFCAB13Q8IY85 973 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 BMPERQ8N8U9 685 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 RNF149Q8NC42 400 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 CHDHQ8NE62 594 aaPredicted RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 CSNK2A3Q8NEV1 391 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 TNIP2Q8NFZ5 429 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 NCOA7Q8NI08 942 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 EXOC6Q8TAG9 804 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 C9orf43Q8TAL5 461 aaPredicted RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 SETD7Q8WTS6 366 aaKnown RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 UCMAQ8WVF2 138 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 SLC44A1Q8WWI5 657 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 PRPF31Q8WWY3 499 aaKnown RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 ING5Q8WYH8 240 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 KIFAP3Q92845 792 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 ORAI1Q96D31 301 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 SLC45A3Q96JT2 553 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 CNDP2Q96KP4 475 aaKnown RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 ART5Q96L15 291 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 QRFPRQ96P65 431 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 XPO6Q96QU8 1125 aaKnown RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 ACOX2Q99424 681 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 OPRPNQ99935 248 aaPredicted RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 HSD17B14Q9BPX1 270 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 ACBD6Q9BR61 282 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 FUZQ9BT04 418 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 DDA1Q9BW61 102 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 CCDC94Q9BW85 323 aaPredicted RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 TMEM245Q9H330 911 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 NDST4Q9H3R1 872 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 PDZD7Q9H5P4 517 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 ASB7Q9H672 318 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 MINDY3Q9H8M7 445 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 BRF2Q9HAW0 419 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 FGF22Q9HCT0 170 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 IL1RAPL2Q9NP60 686 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 KCNMB3Q9NPA1 279 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 RPS10P5Q9NQ39 176 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 GKN1Q9NS71 199 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 ADPRHL2Q9NX46 363 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 OGFRQ9NZT2 677 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 HCN3Q9P1Z3 774 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 BCCIPQ9P287 314 aaKnown RBP eCLIP1.49□□□□□ -2.17
CD44-212ENST00000524922 KLHL9Q9P2J3 617 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 WDR35Q9P2L0 1181 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 DEC1Q9P2X7 70 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 THAP10Q9P2Z0 257 aaPredicted RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 POLG2Q9UHN1 485 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 STOML2Q9UJZ1 356 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 TTC7AQ9ULT0 858 aaPredicted RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 UBQLN1Q9UMX0 589 aaKnown RBP1.49□□□□□ -2.17
CD44-212ENST00000524922 GPR52Q9Y2T5 361 aa1.49□□□□□ -2.17
CD44-212ENST00000524922 SONP18583 2426 aaKnown RBP1.48□□□□□ -2.17
CD44-212ENST00000524922 MYO16Q9Y6X6 1858 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 ESPL1Q14674 2120 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 WNK1Q9H4A3 2382 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 BIRC6Q9NR09 4857 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 ZNF840PA6NDX5 716 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 LRRC72A6NJI9 287 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 VCYO14598 125 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 ALOX15BO15296 676 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 MSH4O15457 936 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 LRCH4O75427 683 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 TOM1L1O75674 476 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 SEC31AO94979 1220 aaKnown RBP1.48□□□□□ -2.17
CD44-212ENST00000524922 KLF8O95600 359 aaPredicted RBP1.48□□□□□ -2.17
CD44-212ENST00000524922 MLYCDO95822 493 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 PIGRP01833 764 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 HOXB5P09067 269 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 HMGB1P09429 215 aaKnown RBP1.48□□□□□ -2.17
CD44-212ENST00000524922 GATA1P15976 413 aaPredicted RBP1.48□□□□□ -2.17
CD44-212ENST00000524922 ATF6P18850 670 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 POLR2CP19387 275 aaPredicted RBP1.48□□□□□ -2.17
CD44-212ENST00000524922 GATA2P23769 480 aaPredicted RBP1.48□□□□□ -2.17
CD44-212ENST00000524922 POU1F1P28069 291 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 PEX19P40855 299 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 LHX1P48742 406 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 NR2C2P49116 596 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 TPMTP51580 245 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 C21orf59P57076 290 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 EVCP57679 992 aa1.48□□□□□ -2.17
CD44-212ENST00000524922 UFM1P61960 85 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms