RNA–Protein interactions for RNA: ENST00000524033.5

SPIDR-223, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 2

Gene SPIDR, Length 1,023 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-223ENST00000524033 CARD16Q5EG05 197 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 CATSPEREQ5SY80 951 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 FAHD1Q6P587 224 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 HTR3DQ70Z44 454 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 P2RY8Q86VZ1 359 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 C12orf40Q86WS4 652 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 ZDHHC21Q8IVQ6 265 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 BBS7Q8IWZ6 715 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 LIX1Q8N485 282 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 DCBLD1Q8N8Z6 715 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 IL17RCQ8NAC3 791 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 OR7A2PQ8NGA2 310 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 STARD8Q92502 1023 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 RORBQ92753 470 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 PYURFQ96I23 114 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 CNTNAP3BQ96NU0 1288 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 SMIM14Q96QK8 99 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 BARD1Q99728 777 aaKnown RBP7.54□□□□□ -1.2
SPIDR-223ENST00000524033 CTRCQ99895 268 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 CINPQ9BW66 212 aaPredicted RBP7.54□□□□□ -1.2
SPIDR-223ENST00000524033 CNTNAP3Q9BZ76 1288 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 SMOC1Q9H4F8 434 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 RDH14Q9HBH5 336 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 TM9SF3Q9HD45 589 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 ACOT13Q9NPJ3 140 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 SPHK2Q9NRA0 654 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 SLC6A13Q9NSD5 602 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 EXD2Q9NVH0 621 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 FKBP14Q9NWM8 211 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 DNAJB12Q9NXW2 375 aaKnown RBP7.54□□□□□ -1.2
SPIDR-223ENST00000524033 OPTCQ9UBM4 332 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 LHX3Q9UBR4 397 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 WARS2Q9UGM6 360 aaKnown RBP7.54□□□□□ -1.2
SPIDR-223ENST00000524033 EIF3LQ9Y262 564 aaKnown RBP7.54□□□□□ -1.2
SPIDR-223ENST00000524033 TPRKBQ9Y3C4 175 aa7.54□□□□□ -1.2
SPIDR-223ENST00000524033 CEP250Q9BV73 2442 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 CFAP47Q6ZTR5 3102 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 A0A0D9SEW6 157 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 PABPN1LA6NDY0 278 aaKnown RBP7.53□□□□□ -1.2
SPIDR-223ENST00000524033 F5H5T6 163 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 TM4SF5O14894 197 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 PFDN6O15212 129 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 HOXC11O43248 304 aaPredicted RBP7.53□□□□□ -1.2
SPIDR-223ENST00000524033 ACSL4O60488 711 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 GREM1O60565 184 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 GMNNO75496 209 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 UPK1BO75841 260 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 NADKO95544 446 aaPredicted RBP7.53□□□□□ -1.2
SPIDR-223ENST00000524033 CD160O95971 181 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 SERPINA1P01009 418 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 PGRP06401 933 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 ADRB1P08588 477 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 EBLN1P0CF75 366 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 GSTT2P0CG29 244 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 GSTT2BP0CG30 244 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 ARAFP10398 606 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 SLC2A4P14672 509 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 PRKACGP22612 351 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 FMO3P31513 532 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 SOX18P35713 384 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 KRT20P35900 424 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 KIR2DL1P43626 348 aaPredicted RBP7.53□□□□□ -1.2
SPIDR-223ENST00000524033 MAP2K4P45985 399 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 HSPA7P48741 367 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 PPP5CP53041 499 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 CDH4P55283 916 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 TEKQ02763 1124 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 CACNG1Q06432 222 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 BOP1Q14137 746 aaKnown RBP7.53□□□□□ -1.2
SPIDR-223ENST00000524033 PTGR1Q14914 329 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 NPTX1Q15818 432 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 PHKG1Q16816 387 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 GGTA1PQ4G0N0 100 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 CCDC92Q53HC0 331 aaPredicted RBP7.53□□□□□ -1.2
SPIDR-223ENST00000524033 CDKL4Q5MAI5 379 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 EOGTQ5NDL2 527 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 C10orf120Q5SQS8 335 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 PERM1Q5SV97 790 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 ZNF362Q5T0B9 420 aaPredicted RBP7.53□□□□□ -1.2
SPIDR-223ENST00000524033 DEPDC1Q5TB30 811 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 MLIPQ5VWP3 458 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 TMEM236Q5W0B7 351 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 TCEAL6Q6IPX3 200 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 TUBA3EQ6PEY2 450 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 TTC23LQ6PF05 361 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 NCEH1Q6PIU2 408 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 CHST9Q7L1S5 443 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 TRMT11Q7Z4G4 463 aaKnown RBP7.53□□□□□ -1.2
SPIDR-223ENST00000524033 MILR1Q7Z6M3 343 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 DSG4Q86SJ6 1040 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 CCDC71Q8IV32 467 aaPredicted RBP7.53□□□□□ -1.2
SPIDR-223ENST00000524033 LYSMD2Q8IV50 215 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 ZZZ3Q8IYH5 903 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 PHACTR4Q8IZ21 702 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 LPCAT1Q8NF37 534 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 RHOXF1Q8NHV9 184 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 HMGB4Q8WW32 186 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 APH1BQ8WW43 257 aa7.53□□□□□ -1.2
SPIDR-223ENST00000524033 IPCEF1Q8WWN9 437 aaPredicted RBP7.53□□□□□ -1.2
SPIDR-223ENST00000524033 RLN3Q8WXF3 142 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms