RNA–Protein interactions for RNA: ENST00000523966.5

SKP1-212, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 3

Gene SKP1, Length 899 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-212ENST00000523966 KRT12Q99456 494 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 PRMT1Q99873 361 aaKnown RBP3.41□□□□□ -1.86
SKP1-212ENST00000523966 ASCL2Q99929 193 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 ZNF559Q9BR84 538 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 HOXD1Q9GZZ0 328 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 B3GAT2Q9NPZ5 323 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 LNPEPQ9UIQ6 1025 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 FBXW2Q9UKT8 454 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 PLCL2Q9UPR0 1127 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 SATB2Q9UPW6 733 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 EXOGQ9Y2C4 368 aaKnown RBP3.41□□□□□ -1.86
SKP1-212ENST00000523966 WDR97A6NE52 1622 aa3.41□□□□□ -1.86
SKP1-212ENST00000523966 KIF21AQ7Z4S6 1674 aa3.4□□□□□ -1.86
SKP1-212ENST00000523966 IGLV7-46A0A075B6I9 117 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 A0A087WYN8 130 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 A0A087WZ39 114 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 hCG_38984A0A1B0GV85 526 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 MAGEB16A2A368 324 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 CCDC162PA2VCL2 907 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 ANKDD1BA6NHY2 528 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 FHAD1B1AJZ9 1412 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 ACSL4O60488 711 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 GOSR1O95249 250 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 TRIM49P0CI25 452 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 TRIM49CP0CI26 452 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 FERP16591 822 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 TYMPP19971 482 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 MT3P25713 68 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 GIFP27352 417 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 HNF4AP41235 474 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 MAGEB1P43366 347 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 ARF5P84085 180 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 DHODHQ02127 395 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 UBXN1Q04323 297 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 SRSF9Q13242 221 aaKnown RBP eCLIP3.4□□□□□ -1.87
SKP1-212ENST00000523966 GRB14Q14449 540 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 KRTAP24-1Q3LI83 254 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 LRRC37A5PQ49AS3 106 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 FAM106AQ4KMX7 169 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 AGAP6Q5VW22 663 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 CES4AQ5XG92 561 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 ALKBH5Q6P6C2 394 aaKnown RBP3.4□□□□□ -1.87
SKP1-212ENST00000523966 TMEM126BQ8IUX1 230 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 DCLK2Q8N568 766 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 WDSUB1Q8N9V3 476 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 NUP37Q8NFH4 326 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 NR4A3Q92570 626 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 ZNF274Q96GC6 653 aaPredicted RBP3.4□□□□□ -1.87
SKP1-212ENST00000523966 C2orf48Q96LS8 159 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 PCDHB18PQ96TA0 734 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 TRIM51Q9BSJ1 452 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 PI4K2AQ9BTU6 479 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 CACNG6Q9BXT2 260 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 MRPL9Q9BYD2 267 aaKnown RBP3.4□□□□□ -1.87
SKP1-212ENST00000523966 MED20Q9H944 212 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 VIPAS39Q9H9C1 493 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 STAU2Q9NUL3 570 aaKnown RBP eCLIP3.4□□□□□ -1.87
SKP1-212ENST00000523966 KIAA1210Q9ULL0 1709 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 ZNF510Q9Y2H8 683 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 PYGO1Q9Y3Y4 419 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 CSNK1G3Q9Y6M4 447 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 GRIN2BQ13224 1484 aa3.4□□□□□ -1.87
SKP1-212ENST00000523966 CUL7Q14999 1698 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 VPS8Q8N3P4 1428 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 A0A1W2PR80 420 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 SMIM30A4D0T7 59 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 MTMR11A4FU01 709 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 TRIM64A6NGJ6 449 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 TRIM64BA6NI03 449 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 KPNA7A9QM74 516 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 RTN2O75298 545 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 PNPP00491 289 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 VCLP18206 1134 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 HLA-DPA1P20036 260 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 OPRL1P41146 370 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 SERPINH1P50454 418 aaKnown RBP3.39□□□□□ -1.87
SKP1-212ENST00000523966 OR1D5P58170 312 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 KIAA1024LP59773 190 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 CSNK2BP67870 215 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 FKBP1BP68106 108 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 LCP2Q13094 533 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 DRP2Q13474 957 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 CEP85LQ5SZL2 805 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 ZNF770Q6IQ21 691 aaPredicted RBP3.39□□□□□ -1.87
SKP1-212ENST00000523966 ZNF713Q8N859 430 aaPredicted RBP3.39□□□□□ -1.87
SKP1-212ENST00000523966 OR13C5Q8NGS8 318 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 GANCQ8TET4 914 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 KRT35Q92764 455 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 CASP10Q92851 521 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 SLCO2A1Q92959 643 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 ATP6V0A1Q93050 837 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 DOCK7Q96N67 2140 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 PANX3Q96QZ0 392 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 RASL10BQ96S79 203 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 LRRC2Q9BYS8 371 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 SLC39A8Q9C0K1 460 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 C5orf66Q9H5L9 145 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 UBE2TQ9NPD8 197 aaPredicted RBP3.39□□□□□ -1.87
SKP1-212ENST00000523966 ZDHHC18Q9NUE0 388 aa3.39□□□□□ -1.87
SKP1-212ENST00000523966 COMMD8Q9NX08 183 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms