RNA–Protein interactions for RNA: ENST00000523387.5

CSMD1-212, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 3,989 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-212ENST00000523387 MANEALQ5VSG8 457 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 RETSATQ6NUM9 610 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 NPAS3Q8IXF0 933 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 IQCF2Q8IXL9 164 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 CHCHD4Q8N4Q1 142 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 AKAP1Q92667 903 aaKnown RBP eCLIP8.7□□□□□ -1.02
CSMD1-212ENST00000523387 UFD1Q92890 307 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 C11orf24Q96F05 449 aaPredicted RBP8.7□□□□□ -1.02
CSMD1-212ENST00000523387 TEFMQ96QE5 360 aaKnown RBP8.7□□□□□ -1.02
CSMD1-212ENST00000523387 RACGAP1Q9H0H5 632 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 CCSER2Q9H7U1 834 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 SCML2Q9UQR0 700 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 NCKAP1Q9Y2A7 1128 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 MN1Q10571 1320 aaPredicted RBP8.7□□□□□ -1.02
CSMD1-212ENST00000523387 KDM4FA0A1W2PPD8 638 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 SMLR1H3BR10 107 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 WWP2O00308 870 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 CNMDO75829 334 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 C4BPBP20851 252 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 GPC1P35052 558 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 RPS19P39019 145 aaKnown RBP8.7□□□□□ -1.02
CSMD1-212ENST00000523387 RECQLP46063 649 aaPredicted RBP8.7□□□□□ -1.02
CSMD1-212ENST00000523387 GPLD1P80108 840 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 CDK6Q00534 326 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 ATAT1Q5SQI0 421 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 LYPLAL1Q5VWZ2 237 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 MFSD14CQ5VZR4 134 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 ST6GAL2Q96JF0 529 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 C1QTNF3Q9BXJ4 246 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 GABARAPL1Q9H0R8 117 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 SEMA3GQ9NS98 782 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 SCO2O43819 266 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 PRLP01236 227 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 ETFAP13804 333 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 CD6P30203 668 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 CDH4P55283 916 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 ACVR1Q04771 509 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 C2orf80Q0P641 193 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 PTGES3Q15185 160 aaKnown RBP8.7□□□□□ -1.02
CSMD1-212ENST00000523387 CHRNA6Q15825 494 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 BAK1Q16611 211 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 UPP1Q16831 310 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 ANKRD54Q6NXT1 300 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 GPR142Q7Z601 462 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 GALNT6Q8NCL4 622 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 CLP1Q92989 425 aaKnown RBP8.7□□□□□ -1.02
CSMD1-212ENST00000523387 ART5Q96L15 291 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 OR2A14Q96R47 310 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 SIRT5Q9NXA8 310 aa8.7□□□□□ -1.02
CSMD1-212ENST00000523387 XIRP1Q702N8 1843 aaKnown RBP8.69□□□□□ -1.02
CSMD1-212ENST00000523387 FER1L6Q2WGJ9 1857 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 A0A075B6Q4 140 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 TRAV6A0A075B6T7 132 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 NME6O75414 186 aaPredicted RBP8.69□□□□□ -1.02
CSMD1-212ENST00000523387 KCNK5O95279 499 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 SNAI1O95863 264 aaPredicted RBP8.69□□□□□ -1.02
CSMD1-212ENST00000523387 SERPIND1P05546 499 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 ZFP36L2P47974 494 aaKnown RBP8.69□□□□□ -1.02
CSMD1-212ENST00000523387 ATN1P54259 1190 aaPredicted RBP8.69□□□□□ -1.02
CSMD1-212ENST00000523387 NKX3-2P78367 333 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 GALK2Q01415 458 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 UGT8Q16880 541 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 UAP1L1Q3KQV9 507 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 RGMBQ6NW40 437 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 SBSNQ6UWP8 590 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 C11orf96Q7Z7L8 435 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 CCDC190Q86UF4 302 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 MARCH9Q86YJ5 346 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 NAGSQ8N159 534 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 DTX3Q8N9I9 347 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 TMEM159Q96B96 161 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 SIPA1Q96FS4 1042 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 BRD9Q9H8M2 597 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 GULP1Q9UBP9 304 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 EIF3KQ9UBQ5 218 aaKnown RBP8.69□□□□□ -1.02
CSMD1-212ENST00000523387 DYRK1BQ9Y463 629 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 ARID2Q68CP9 1835 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 PHIPQ8WWQ0 1821 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 NFKBIEO00221 500 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 ENTPD6O75354 484 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 GPX5O75715 221 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 GBAP04062 536 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 GRK5P34947 590 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 SPAM1P38567 509 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 MAN2A2P49641 1150 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 RPA4Q13156 261 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 LARS2Q15031 903 aaKnown RBP8.69□□□□□ -1.02
CSMD1-212ENST00000523387 SF1Q15637 639 aaKnown RBP8.69□□□□□ -1.02
CSMD1-212ENST00000523387 MICAQ29983 383 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 CXorf57Q6NSI4 855 aaKnown RBP8.69□□□□□ -1.02
CSMD1-212ENST00000523387 CXCL17Q6UXB2 119 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 ANKS3Q6ZW76 656 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 NATD1Q8N6N6 113 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 C7orf57Q8NEG2 295 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 MAP6Q96JE9 813 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 HYLS1Q96M11 299 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 NELL2Q99435 816 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 NIPSNAP1Q9BPW8 284 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 FNDC11Q9BVV2 318 aa8.69□□□□□ -1.02
CSMD1-212ENST00000523387 CTPS2Q9NRF8 586 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms