RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 WWOXQ9NZC7 414 aa19.45■□□□□ 0.7
SDCBP-209ENST00000522243 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP19.45■□□□□ 0.75e-6■■□□□ 11.9
SDCBP-209ENST00000522243 A8MUA0 341 aa19.44■□□□□ 0.7
SDCBP-209ENST00000522243 TAPBPO15533 448 aa19.44■□□□□ 0.7
SDCBP-209ENST00000522243 SERPINA6P08185 405 aa19.44■□□□□ 0.7
SDCBP-209ENST00000522243 GNAZP19086 355 aa19.44■□□□□ 0.7
SDCBP-209ENST00000522243 MST1P26927 711 aa19.44■□□□□ 0.7
SDCBP-209ENST00000522243 PLTPP55058 493 aa19.44■□□□□ 0.7
SDCBP-209ENST00000522243 GPX6P59796 221 aa19.44■□□□□ 0.7
SDCBP-209ENST00000522243 SLBPQ14493 270 aaKnown RBP eCLIP19.44■□□□□ 0.7
SDCBP-209ENST00000522243 TRADDQ15628 312 aa19.44■□□□□ 0.7
SDCBP-209ENST00000522243 MEP1AQ16819 746 aa19.44■□□□□ 0.7
SDCBP-209ENST00000522243 ZNF766Q5HY98 468 aa19.44■□□□□ 0.7
SDCBP-209ENST00000522243 SYT10Q6XYQ8 523 aa19.44■□□□□ 0.7
SDCBP-209ENST00000522243 SLCO4C1Q6ZQN7 724 aa19.44■□□□□ 0.7
SDCBP-209ENST00000522243 CCDC25Q86WR0 208 aa19.44■□□□□ 0.7
SDCBP-209ENST00000522243 CTAGE3PQ8IX95 158 aa19.44■□□□□ 0.7
SDCBP-209ENST00000522243 KIF2BQ8N4N8 673 aa19.44■□□□□ 0.7
SDCBP-209ENST00000522243 SIGLEC12Q96PQ1 595 aa19.44■□□□□ 0.7
SDCBP-209ENST00000522243 TMEM79Q9BSE2 394 aa19.44■□□□□ 0.7
SDCBP-209ENST00000522243 FAM159BA6NKW6 160 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 PSMD12O00232 456 aaPredicted RBP19.43■□□□□ 0.7
SDCBP-209ENST00000522243 PRMT3O60678 531 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 FAM155BO75949 473 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 MYBL2P10244 700 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 CD1DP15813 335 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 STMN1P16949 149 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 MAOAP21397 527 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 GP5P40197 560 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 CD96P40200 585 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 HSPA7P48741 367 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 BTN3A2P78410 334 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 TUBA3CQ13748 450 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 OR4D1Q15615 310 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 C1QL3Q5VWW1 255 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 ZNF787Q6DD87 383 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 TUBA3EQ6PEY2 450 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 GFRALQ6UXV0 394 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 FJX1Q86VR8 437 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 GPSM1Q86YR5 675 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 KLHDC8AQ8IYD2 350 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 CA13Q8N1Q1 262 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 EXT2Q93063 718 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 GPR22Q99680 433 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 HES7Q9BYE0 225 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 CDCP1Q9H5V8 836 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 NECTIN3Q9NQS3 549 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 KLHL1Q9NR64 748 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 ABI3Q9P2A4 366 aa19.43■□□□□ 0.7
SDCBP-209ENST00000522243 UTP11Q9Y3A2 253 aaKnown RBP19.43■□□□□ 0.7
SDCBP-209ENST00000522243 CRYABP02511 175 aaKnown RBP19.42■□□□□ 0.7
SDCBP-209ENST00000522243 C1QAP02745 245 aa19.42■□□□□ 0.7
SDCBP-209ENST00000522243 RNH1P13489 461 aaKnown RBP19.42■□□□□ 0.7
SDCBP-209ENST00000522243 SPINK14Q6IE38 97 aa19.42■□□□□ 0.7
SDCBP-209ENST00000522243 TMIGD1Q6UXZ0 262 aa19.42■□□□□ 0.7
SDCBP-209ENST00000522243 QSOX2Q6ZRP7 698 aa19.42■□□□□ 0.7
SDCBP-209ENST00000522243 PPM1NQ8N819 430 aa19.42■□□□□ 0.7
SDCBP-209ENST00000522243 SNX31Q8N9S9 440 aa19.42■□□□□ 0.7
SDCBP-209ENST00000522243 UTP23Q9BRU9 249 aaKnown RBP19.42■□□□□ 0.7
SDCBP-209ENST00000522243 DNAJC11Q9NVH1 559 aa19.42■□□□□ 0.7
SDCBP-209ENST00000522243 SPTBN1Q01082 2364 aaKnown RBP19.41■□□□□ 0.7
SDCBP-209ENST00000522243 GABRR3A8MPY1 467 aa19.41■□□□□ 0.7
SDCBP-209ENST00000522243 PRAMEF4O60810 478 aa19.41■□□□□ 0.7
SDCBP-209ENST00000522243 WISP2O76076 250 aa19.41■□□□□ 0.7
SDCBP-209ENST00000522243 UNC5CO95185 931 aa19.41■□□□□ 0.7
SDCBP-209ENST00000522243 STSP08842 583 aa19.41■□□□□ 0.7
SDCBP-209ENST00000522243 HNRNPH1P31943 449 aaKnown RBP19.41■□□□□ 0.7
SDCBP-209ENST00000522243 PER3P56645 1201 aa19.41■□□□□ 0.7
SDCBP-209ENST00000522243 TAS2R50P59544 299 aa19.41■□□□□ 0.7
SDCBP-209ENST00000522243 STXBP1P61764 594 aaKnown RBP19.41■□□□□ 0.7
SDCBP-209ENST00000522243 ETF1P62495 437 aaKnown RBP19.41■□□□□ 0.7
SDCBP-209ENST00000522243 OC90Q02509 493 aaPredicted RBP19.41■□□□□ 0.7
SDCBP-209ENST00000522243 ILF2Q12905 390 aaKnown RBP19.41■□□□□ 0.7
SDCBP-209ENST00000522243 RUNX2Q13950 521 aa19.41■□□□□ 0.7
SDCBP-209ENST00000522243 OR1C1Q15619 314 aa19.41■□□□□ 0.7
SDCBP-209ENST00000522243 KBTBD12Q3ZCT8 623 aa19.41■□□□□ 0.7
SDCBP-209ENST00000522243 PRAMEF9Q5VWM5 478 aa19.41■□□□□ 0.7
SDCBP-209ENST00000522243 ADNP2Q6IQ32 1131 aa19.41■□□□□ 0.7
SDCBP-209ENST00000522243 KRT78Q8N1N4 520 aa19.41■□□□□ 0.7
SDCBP-209ENST00000522243 TCAIMQ8N3R3 496 aa19.41■□□□□ 0.7
SDCBP-209ENST00000522243 SLC5A8Q8N695 610 aa19.41■□□□□ 0.7
SDCBP-209ENST00000522243 MDS2Q8NDY4 140 aa19.41■□□□□ 0.7
SDCBP-209ENST00000522243 DNAJB8Q8NHS0 232 aa19.41■□□□□ 0.7
SDCBP-209ENST00000522243 FBXO25Q8TCJ0 367 aa19.41■□□□□ 0.7
SDCBP-209ENST00000522243 ELP5Q8TE02 316 aa19.41■□□□□ 0.7
SDCBP-209ENST00000522243 GAL3ST3Q96A11 431 aa19.41■□□□□ 0.7
SDCBP-209ENST00000522243 FAR2Q96K12 515 aa19.41■□□□□ 0.7
SDCBP-209ENST00000522243 CLK4Q9HAZ1 481 aaKnown RBP19.41■□□□□ 0.7
SDCBP-209ENST00000522243 PRDM9Q9NQV7 894 aa19.41■□□□□ 0.7
SDCBP-209ENST00000522243 CD274Q9NZQ7 290 aa19.41■□□□□ 0.7
SDCBP-209ENST00000522243 LRIT2A6NDA9 550 aa19.4■□□□□ 0.7
SDCBP-209ENST00000522243 CLGNO14967 610 aa19.4■□□□□ 0.7
SDCBP-209ENST00000522243 ERI3O43414 337 aaKnown RBP19.4■□□□□ 0.7
SDCBP-209ENST00000522243 ZG16O60844 167 aa19.4■□□□□ 0.7
SDCBP-209ENST00000522243 SPRP35270 261 aaPredicted RBP19.4■□□□□ 0.7
SDCBP-209ENST00000522243 MAGEA4P43358 317 aa19.4■□□□□ 0.7
SDCBP-209ENST00000522243 RAB10P61026 200 aa19.4■□□□□ 0.7
SDCBP-209ENST00000522243 ATP6V0D1P61421 351 aa19.4■□□□□ 0.7
SDCBP-209ENST00000522243 ZKSCAN8Q15776 578 aaPredicted RBP19.4■□□□□ 0.7
SDCBP-209ENST00000522243 SULT1C3Q6IMI6 304 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms