RNA–Protein interactions for RNA: ENST00000521559.1

VPS13B-209, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 466 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-209ENST00000521559 PDCD11Q14690 1871 aaKnown RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 VWA8A3KMH1 1905 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 TEX13CA0A0J9YWL9 993 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 MACROD2A1Z1Q3 448 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 FAM172BPA6NC97 362 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 PABPN1LA6NDY0 278 aaKnown RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 GOLGA6L9A6NEM1 432 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 SHISA7A6NL88 538 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 HSPB2A8KAH6 182 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 PALM2-AKAP2B1ALY0 433 aaPredicted RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 ZNF487B1APH4 448 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 NPIPB11E5RHQ5 1161 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 E9PAM4 449 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 NEDD8-MDP1E9PL57 170 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 SPECC1L-ADORA2AF8WAN1 911 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 PI4K2BG5E9Z4 385 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 FAM72CH0Y354 149 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 EEF2KO00418 725 aaKnown RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 PSTPIP1O43586 416 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 BUB1O43683 1085 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 SPOPO43791 374 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 LMX1BO60663 402 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 TBL1XO60907 577 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 CLDN11O75508 207 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 PALMO75781 387 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 KDM4BO94953 1096 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 LUC7L3O95232 432 aaKnown RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 COX7A2P14406 83 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 TCF4P15884 667 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 TCEA1P23193 301 aaKnown RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 CTNNA2P26232 953 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 ABCD3P28288 659 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 HOXC13P31276 330 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 HNRNPH1P31943 449 aaKnown RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 PIGAP37287 484 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 OPRD1P41143 372 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 EIF2DP41214 584 aaKnown RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 SSR1P43307 286 aaKnown RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 TNFRSF4P43489 277 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 SGSHP51688 502 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 ARSEP51690 589 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 PLK1P53350 603 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 VCPP55072 806 aaKnown RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 CDH4P55283 916 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 STARD6P59095 220 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 SIGLEC14Q08ET2 396 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 ZNF155Q12901 538 aaPredicted RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 DMC1Q14565 340 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 PDK2Q15119 407 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 MLF2Q15773 248 aaPredicted RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 HSPB2Q16082 182 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 CCDC6Q16204 474 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 DPYSL2Q16555 572 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 HIST2H2ACQ16777 129 aaPredicted RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 CA9Q16790 459 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 RABGAP1LQ5R372 815 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 LCE1EQ5T753 118 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 FAM69AQ5T7M9 428 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 SERTAD4-AS1Q5TG53 156 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 FAM72AQ5TYM5 149 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 PMS2CLQ68D20 193 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 FAM72DQ6L9T8 149 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 RWDD4Q6NW29 188 aaKnown RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 FAM180BQ6P0A1 224 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 CCNI2Q6ZMN8 369 aaPredicted RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 ZNF852Q6ZMS4 543 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 C1orf122Q6ZSJ8 110 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 TPRG1Q6ZUI0 275 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 CHST9Q7L1S5 443 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 GSTA5Q7RTV2 222 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 PEX26Q7Z412 305 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 GPAT4Q86UL3 456 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 NT5DC3Q86UY8 548 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 FAM72BQ86X60 149 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 MAP7D3Q8IWC1 876 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 KIAA2013Q8IYS2 634 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 KATNAL2Q8IYT4 538 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 RCOR2Q8IZ40 523 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 SYCE1Q8N0S2 351 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 CCAR2Q8N163 923 aaKnown RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 PYROXD2Q8N2H3 581 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 RTL3Q8N8U3 475 aaKnown RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 ZNF557Q8N988 423 aaPredicted RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 KCTD6Q8NC69 237 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 FAM3CQ92520 227 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 FIG4Q92562 907 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 RAPGEF5Q92565 580 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 FBXL8Q96CD0 374 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 TBC1D31Q96DN5 1066 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 PRICKLE1Q96MT3 831 aaPredicted RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 RPRD1AQ96P16 312 aaPredicted RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 XPO6Q96QU8 1125 aaKnown RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 P2RY13Q9BPV8 354 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 SNRNP25Q9BV90 132 aaKnown RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 ZYG11BQ9C0D3 744 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 DHX35Q9H5Z1 703 aaKnown RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 ZWILCHQ9H900 591 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 FBRSL1Q9HCM7 1045 aaKnown RBP3.11□□□□□ -1.91
VPS13B-209ENST00000521559 LZTFL1Q9NQ48 299 aa3.11□□□□□ -1.91
VPS13B-209ENST00000521559 HEBP1Q9NRV9 189 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms