RNA–Protein interactions for RNA: ENST00000521232.1

SQLE-205, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 711 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-205ENST00000521232 WWOXQ9NZC7 414 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 CD274Q9NZQ7 290 aa16.05■□□□□ 0.16
SQLE-205ENST00000521232 NAV2Q8IVL1 2488 aa16.04■□□□□ 0.16
SQLE-205ENST00000521232 PRAMEF4O60810 478 aa16.04■□□□□ 0.16
SQLE-205ENST00000521232 AGFG2O95081 481 aa16.04■□□□□ 0.16
SQLE-205ENST00000521232 WDPCPO95876 746 aa16.04■□□□□ 0.16
SQLE-205ENST00000521232 JAK1P23458 1154 aa16.04■□□□□ 0.16
SQLE-205ENST00000521232 GMPRP36959 345 aa16.04■□□□□ 0.16
SQLE-205ENST00000521232 HSPA7P48741 367 aa16.04■□□□□ 0.16
SQLE-205ENST00000521232 STXBP1P61764 594 aaKnown RBP16.04■□□□□ 0.16
SQLE-205ENST00000521232 DLG1Q12959 904 aa16.04■□□□□ 0.16
SQLE-205ENST00000521232 SLBPQ14493 270 aaKnown RBP eCLIP16.04■□□□□ 0.16
SQLE-205ENST00000521232 EXT1Q16394 746 aa16.04■□□□□ 0.16
SQLE-205ENST00000521232 BTBD16Q32M84 506 aa16.04■□□□□ 0.16
SQLE-205ENST00000521232 SFT2D3Q587I9 215 aa16.04■□□□□ 0.16
SQLE-205ENST00000521232 FBXO48Q5FWF7 155 aa16.04■□□□□ 0.16
SQLE-205ENST00000521232 TOR1AIP1Q5JTV8 583 aa16.04■□□□□ 0.16
SQLE-205ENST00000521232 PRAMEF9Q5VWM5 478 aa16.04■□□□□ 0.16
SQLE-205ENST00000521232 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.04■□□□□ 0.16
SQLE-205ENST00000521232 MMGT1Q8N4V1 131 aa16.04■□□□□ 0.16
SQLE-205ENST00000521232 PRR7Q8TB68 274 aa16.04■□□□□ 0.16
SQLE-205ENST00000521232 GRHL3Q8TE85 626 aa16.04■□□□□ 0.16
SQLE-205ENST00000521232 WDR34Q96EX3 536 aa16.04■□□□□ 0.16
SQLE-205ENST00000521232 NMRAL1Q9HBL8 299 aa16.04■□□□□ 0.16
SQLE-205ENST00000521232 TEKT2Q9UIF3 430 aa16.04■□□□□ 0.16
SQLE-205ENST00000521232 ZNF490Q9ULM2 529 aaPredicted RBP16.04■□□□□ 0.16
SQLE-205ENST00000521232 RNF112Q9ULX5 631 aa16.04■□□□□ 0.16
SQLE-205ENST00000521232 NBPF19A0A087WUL8 3843 aa16.04■□□□□ 0.16
SQLE-205ENST00000521232 TRAV17A0A0B4J275 112 aa16.03■□□□□ 0.16
SQLE-205ENST00000521232 LRIT2A6NDA9 550 aa16.03■□□□□ 0.16
SQLE-205ENST00000521232 ANKUB1A6NFN9 424 aa16.03■□□□□ 0.16
SQLE-205ENST00000521232 C4orf51C9J302 202 aa16.03■□□□□ 0.16
SQLE-205ENST00000521232 CLGNO14967 610 aa16.03■□□□□ 0.16
SQLE-205ENST00000521232 B4GALT2O60909 372 aa16.03■□□□□ 0.16
SQLE-205ENST00000521232 SEMA7AO75326 666 aa16.03■□□□□ 0.16
SQLE-205ENST00000521232 CLEC3AO75596 197 aa16.03■□□□□ 0.16
SQLE-205ENST00000521232 TBX6O95947 436 aaPredicted RBP16.03■□□□□ 0.16
SQLE-205ENST00000521232 ACTN3Q08043 901 aaPredicted RBP16.03■□□□□ 0.16
SQLE-205ENST00000521232 SLMAPQ14BN4 828 aa16.03■□□□□ 0.16
SQLE-205ENST00000521232 EFTUD2Q15029 972 aaKnown RBP eCLIP16.03■□□□□ 0.16
SQLE-205ENST00000521232 ABHD17BQ5VST6 288 aa16.03■□□□□ 0.16
SQLE-205ENST00000521232 PAPD4Q6PIY7 484 aaKnown RBP16.03■□□□□ 0.16
SQLE-205ENST00000521232 QSOX2Q6ZRP7 698 aa16.03■□□□□ 0.16
SQLE-205ENST00000521232 TBC1D1Q86TI0 1168 aaPredicted RBP16.03■□□□□ 0.16
SQLE-205ENST00000521232 RELL1Q8IUW5 271 aa16.03■□□□□ 0.16
SQLE-205ENST00000521232 ST6GALNAC3Q8NDV1 305 aa16.03■□□□□ 0.16
SQLE-205ENST00000521232 FAR1Q8WVX9 515 aa16.03■□□□□ 0.16
SQLE-205ENST00000521232 TSLPQ969D9 159 aa16.03■□□□□ 0.16
SQLE-205ENST00000521232 GAL3ST3Q96A11 431 aa16.03■□□□□ 0.16
SQLE-205ENST00000521232 MS4A6EQ96DS6 147 aa16.03■□□□□ 0.16
SQLE-205ENST00000521232 PTCD3Q96EY7 689 aaKnown RBP16.03■□□□□ 0.16
SQLE-205ENST00000521232 ATOH8Q96SQ7 321 aa16.03■□□□□ 0.16
SQLE-205ENST00000521232 LPAR4Q99677 370 aa16.03■□□□□ 0.16
SQLE-205ENST00000521232 CD244Q9BZW8 370 aa16.03■□□□□ 0.16
SQLE-205ENST00000521232 ALG9Q9H6U8 611 aa16.03■□□□□ 0.16
SQLE-205ENST00000521232 MMP25Q9NPA2 562 aa16.03■□□□□ 0.16
SQLE-205ENST00000521232 IGSF5Q9NSI5 407 aa16.03■□□□□ 0.16
SQLE-205ENST00000521232 HMX2A2RU54 273 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 BLACEA4D250 179 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 ANKDD1BA6NHY2 528 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 A8MUI8 341 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 PRMT3O60678 531 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 UQCRHP07919 91 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 LTA4HP09960 611 aaKnown RBP16.02■□□□□ 0.16
SQLE-205ENST00000521232 RNH1P13489 461 aaKnown RBP16.02■□□□□ 0.16
SQLE-205ENST00000521232 EPORP19235 508 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 TFEBP19484 476 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 HNRNPH1P31943 449 aaKnown RBP16.02■□□□□ 0.16
SQLE-205ENST00000521232 CASP2P42575 452 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 OR4D2P58180 307 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 BTN3A2P78410 334 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 BTG2P78543 158 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 DOC2AQ14183 400 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 E2F2Q14209 437 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 TBCCQ15814 346 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 PDK4Q16654 411 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 ADPRMQ3LIE5 342 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 XKR6Q5GH73 641 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 CEP128Q6ZU80 1094 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 VN1R5Q7Z5H4 357 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 CCDC91Q7Z6B0 441 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 CA13Q8N1Q1 262 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 ZNF354BQ96LW1 612 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 PTCHD1Q96NR3 888 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 EFCAB11Q9BUY7 163 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 NPLQ9BXD5 320 aaPredicted RBP16.02■□□□□ 0.16
SQLE-205ENST00000521232 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.02■□□□□ 0.16
SQLE-205ENST00000521232 RHBGQ9H310 441 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 KCNK13Q9HB14 408 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 NUDT4Q9NZJ9 180 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 DMGDHQ9UI17 866 aaKnown RBP16.02■□□□□ 0.16
SQLE-205ENST00000521232 ACOT9Q9Y305 439 aa16.02■□□□□ 0.16
SQLE-205ENST00000521232 DOPEY1Q5JWR5 2465 aa16.01■□□□□ 0.15
SQLE-205ENST00000521232 OR5H15A6NDH6 313 aa16.01■□□□□ 0.15
SQLE-205ENST00000521232 FAM227AF5H4B4 570 aa16.01■□□□□ 0.15
SQLE-205ENST00000521232 KERAO60938 352 aa16.01■□□□□ 0.15
SQLE-205ENST00000521232 F10P00742 488 aa16.01■□□□□ 0.15
SQLE-205ENST00000521232 S100BP04271 92 aaPredicted RBP16.01■□□□□ 0.15
SQLE-205ENST00000521232 TUBB4AP04350 444 aa16.01■□□□□ 0.15
SQLE-205ENST00000521232 EDN3P14138 238 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms