RNA–Protein interactions for RNA: ENST00000520265.1

VEGFA-221, Transcript of vascular endothelial growth factor A, humanhuman

TSL 5

Gene VEGFA, Length 336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-221ENST00000520265 ADNP2Q6IQ32 1131 aa13.37□□□□□ -0.27
VEGFA-221ENST00000520265 TRIM40Q6P9F5 258 aa13.37□□□□□ -0.27
VEGFA-221ENST00000520265 TRMT10CQ7L0Y3 403 aaKnown RBP13.37□□□□□ -0.27
VEGFA-221ENST00000520265 CPEB2Q7Z5Q1 589 aaKnown RBP13.37□□□□□ -0.27
VEGFA-221ENST00000520265 HPS6Q86YV9 775 aa13.37□□□□□ -0.27
VEGFA-221ENST00000520265 RBMXL3Q8N7X1 1067 aaKnown RBP13.37□□□□□ -0.27
VEGFA-221ENST00000520265 CREB3L4Q8TEY5 395 aa13.37□□□□□ -0.27
VEGFA-221ENST00000520265 DCAKDQ8WVC6 231 aa13.37□□□□□ -0.27
VEGFA-221ENST00000520265 UBLCP1Q8WVY7 318 aaPredicted RBP13.37□□□□□ -0.27
VEGFA-221ENST00000520265 TSLPQ969D9 159 aa13.37□□□□□ -0.27
VEGFA-221ENST00000520265 ATP6V1E2Q96A05 226 aa13.37□□□□□ -0.27
VEGFA-221ENST00000520265 GAL3ST3Q96A11 431 aa13.37□□□□□ -0.27
VEGFA-221ENST00000520265 PHF21BQ96EK2 531 aa13.37□□□□□ -0.27
VEGFA-221ENST00000520265 OR1F2PQ96R84 312 aa13.37□□□□□ -0.27
VEGFA-221ENST00000520265 SLC6A16Q9GZN6 736 aa13.37□□□□□ -0.27
VEGFA-221ENST00000520265 REXO4Q9GZR2 422 aaKnown RBP13.37□□□□□ -0.27
VEGFA-221ENST00000520265 CLMPQ9H6B4 373 aa13.37□□□□□ -0.27
VEGFA-221ENST00000520265 ACTR8Q9H981 624 aa13.37□□□□□ -0.27
VEGFA-221ENST00000520265 ZBTB20Q9HC78 741 aaPredicted RBP13.37□□□□□ -0.27
VEGFA-221ENST00000520265 BSNQ9UPA5 3926 aa13.37□□□□□ -0.27
VEGFA-221ENST00000520265 LRRC14BA6NHZ5 514 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 SMIM23A6NLE4 172 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 A8MUI8 341 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 PCDH17O14917 1159 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 RIPK2O43353 540 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 B3GALT2O43825 422 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 DNAJB6O75190 326 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 VPS4BO75351 444 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 F10P00742 488 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 SNRPAP09012 282 aaKnown RBP13.36□□□□□ -0.27
VEGFA-221ENST00000520265 FAM153BP0C7A2 387 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 PRR35P0CG20 571 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 RNH1P13489 461 aaKnown RBP13.36□□□□□ -0.27
VEGFA-221ENST00000520265 HNRNPH1P31943 449 aaKnown RBP13.36□□□□□ -0.27
VEGFA-221ENST00000520265 ALDH18A1P54886 795 aaKnown RBP13.36□□□□□ -0.27
VEGFA-221ENST00000520265 OR4D2P58180 307 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 AP2B1P63010 937 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 Q0VFX4 171 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 SETDB1Q15047 1291 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 PCOLCEQ15113 449 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 TSNAXIP1Q2TAA8 658 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 FAM153CQ494X1 144 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 PRR30Q53SZ7 412 aaPredicted RBP13.36□□□□□ -0.27
VEGFA-221ENST00000520265 SFT2D3Q587I9 215 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 MED27Q6P2C8 311 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 ISLR2Q6UXK2 745 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 ANKRD37Q7Z713 158 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 PLD6Q8N2A8 252 aaKnown RBP13.36□□□□□ -0.27
VEGFA-221ENST00000520265 AFAP1L2Q8N4X5 818 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 PTGR2Q8N8N7 351 aaPredicted RBP13.36□□□□□ -0.27
VEGFA-221ENST00000520265 ARMC2Q8NEN0 867 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 RHEBL1Q8TAI7 183 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 UBTD2Q8WUN7 234 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 UBE2E3Q969T4 207 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 PNPLA2Q96AD5 504 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 PTCHD1Q96NR3 888 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 WDR77Q9BQA1 342 aaPredicted RBP13.36□□□□□ -0.27
VEGFA-221ENST00000520265 TUBB6Q9BUF5 446 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 ZNF700Q9H0M5 742 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 EHD1Q9H4M9 534 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 ZNF358Q9NW07 568 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 XPR1Q9UBH6 696 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 VPS4AQ9UN37 437 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 B3GNT3Q9Y2A9 372 aa13.36□□□□□ -0.27
VEGFA-221ENST00000520265 DYTNA2CJ06 578 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 A8MUA0 341 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 C4orf51C9J302 202 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 FAM227AF5H4B4 570 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 SAP18O00422 153 aaKnown RBP13.35□□□□□ -0.27
VEGFA-221ENST00000520265 PRMT3O60678 531 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 CLEC3AO75596 197 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 SIX3O95343 332 aaPredicted RBP13.35□□□□□ -0.27
VEGFA-221ENST00000520265 SERPINA7P05543 415 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 ABHD2P08910 425 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 RBP1P09455 135 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 ITGAMP11215 1152 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 ICAM2P13598 275 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 IL10P22301 178 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 GSTM2P28161 218 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 EEF1DP29692 281 aaKnown RBP13.35□□□□□ -0.27
VEGFA-221ENST00000520265 RAP1GDS1P52306 607 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 EFNA3P52797 238 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 PHEXP78562 749 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 HYAL2Q12891 473 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 GTF2H2Q13888 395 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 TECRLQ5HYJ1 363 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 GTF2H2CQ6P1K8 395 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 PAPD4Q6PIY7 484 aaKnown RBP13.35□□□□□ -0.27
VEGFA-221ENST00000520265 TMEM205Q6UW68 189 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 IQCKQ8N0W5 287 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 FAM47BQ8NA70 645 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 DNAJB14Q8TBM8 379 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 MS4A6EQ96DS6 147 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 F2RL3Q96RI0 385 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 LPAR4Q99677 370 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 CCDC77Q9BR77 488 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 FUT8Q9BYC5 575 aa13.35□□□□□ -0.27
VEGFA-221ENST00000520265 PITHD1Q9GZP4 211 aaPredicted RBP13.35□□□□□ -0.27
VEGFA-221ENST00000520265 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.35□□□□□ -0.277e-8■□□□□ 10.2
VEGFA-221ENST00000520265 NT5DC2Q9H857 520 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms