RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 MRPL1Q9BYD6 325 aaKnown RBP16.91■□□□□ 0.3
SDC2-205ENST00000520233 SLC7A5P2Q9GIP4 190 aa16.91■□□□□ 0.3
SDC2-205ENST00000520233 ROGDIQ9GZN7 287 aa16.91■□□□□ 0.3
SDC2-205ENST00000520233 ACTR5Q9H9F9 607 aaPredicted RBP16.91■□□□□ 0.3
SDC2-205ENST00000520233 ANKHQ9HCJ1 492 aa16.91■□□□□ 0.3
SDC2-205ENST00000520233 NPHS2Q9NP85 383 aa16.91■□□□□ 0.3
SDC2-205ENST00000520233 PRDM7Q9NQW5 492 aa16.91■□□□□ 0.3
SDC2-205ENST00000520233 B3GALT1Q9Y5Z6 326 aa16.91■□□□□ 0.3
SDC2-205ENST00000520233 PTPRBP23467 1997 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 A0A088AWK7 358 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 ATP6AP2A0A1C7CYW4 349 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 SRRM3A6NNA2 597 aaPredicted RBP16.9■□□□□ 0.3
SDC2-205ENST00000520233 SDHDO14521 159 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 FOXS1O43638 330 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 SHOX2O60902 331 aaPredicted RBP16.9■□□□□ 0.3
SDC2-205ENST00000520233 CPNE3O75131 537 aaKnown RBP16.9■□□□□ 0.3
SDC2-205ENST00000520233 ATP6AP2O75787 350 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 TNFSF15O95150 251 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 MED26O95402 600 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 ZNF10P21506 573 aaPredicted RBP16.9■□□□□ 0.3
SDC2-205ENST00000520233 BSGP35613 385 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 AQP5P55064 265 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 GABREP78334 506 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 CAMK2BQ13554 666 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 AP5B1Q2VPB7 878 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 SPIN4Q56A73 249 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 VWA5B1Q5TIE3 1220 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 CGB2Q6NT52 195 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 IGF2-ASQ6U949 168 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 TTLL10Q6ZVT0 673 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 TUBGCP3Q96CW5 907 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 MVB12AQ96EY5 273 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 APIPQ96GX9 242 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 MAELQ96JY0 434 aaKnown RBP16.9■□□□□ 0.3
SDC2-205ENST00000520233 QRFPRQ96P65 431 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 C17orf62Q9BQA9 187 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 NRSN2Q9GZP1 204 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 LRTM1Q9HBL6 345 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 TXLNGQ9NUQ3 528 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 C1orf109Q9NX04 203 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 SIRT5Q9NXA8 310 aa16.9■□□□□ 0.3
SDC2-205ENST00000520233 DHCR7Q9UBM7 475 aaKnown RBP16.9■□□□□ 0.3
SDC2-205ENST00000520233 A0A1B0GX78 115 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 C9orf172C9J069 976 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 RTCAO00442 366 aaKnown RBP16.89■□□□□ 0.29
SDC2-205ENST00000520233 GALR3O60755 368 aaPredicted RBP16.89■□□□□ 0.29
SDC2-205ENST00000520233 DIAPH2O60879 1101 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 PEX11AO75192 247 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 SEC22BO75396 215 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 SCELO95171 688 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 NSA2O95478 260 aaKnown RBP16.89■□□□□ 0.29
SDC2-205ENST00000520233 IL1RNP18510 177 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 DRD4P21917 467 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 ALAS2P22557 587 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 AVPR1BP47901 424 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 IDH3AP50213 366 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 MTTPP55157 894 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 SKP1P63208 163 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 BTN3A2P78410 334 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 ACSM2AQ08AH3 577 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 SMU1Q2TAY7 513 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 DEFB134Q4QY38 66 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 SLC9B1Q4ZJI4 515 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 ATP6AP1LQ52LC2 224 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 C6orf136Q5SQH8 315 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 ACSM2BQ68CK6 577 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 PRMT9Q6P2P2 845 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 LARP4Q71RC2 724 aaKnown RBP eCLIP16.89■□□□□ 0.29
SDC2-205ENST00000520233 PAGE2Q7Z2X7 111 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 COMMD6Q7Z4G1 85 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 NUDT13Q86X67 352 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 ZFAND4Q86XD8 727 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 C1orf52Q8N6N3 182 aaKnown RBP16.89■□□□□ 0.29
SDC2-205ENST00000520233 RFWD2Q8NHY2 731 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 PROKR1Q8TCW9 393 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 STON2Q8WXE9 905 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 CLIP3Q96DZ5 547 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 C11orf24Q96F05 449 aaPredicted RBP16.89■□□□□ 0.29
SDC2-205ENST00000520233 THOC1Q96FV9 657 aaKnown RBP16.89■□□□□ 0.29
SDC2-205ENST00000520233 SLC46A1Q96NT5 459 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 ZNF717Q9BY31 904 aaPredicted RBP16.89■□□□□ 0.29
SDC2-205ENST00000520233 ULBP3Q9BZM4 244 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 NSRP1Q9H0G5 558 aaKnown RBP16.89■□□□□ 0.29
SDC2-205ENST00000520233 WDR55Q9H6Y2 383 aaPredicted RBP16.89■□□□□ 0.29
SDC2-205ENST00000520233 DDX31Q9H8H2 851 aaKnown RBP16.89■□□□□ 0.29
SDC2-205ENST00000520233 AKTIPQ9H8T0 292 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 COPS7BQ9H9Q2 264 aaPredicted RBP16.89■□□□□ 0.29
SDC2-205ENST00000520233 KCNK13Q9HB14 408 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 LHX9Q9NQ69 397 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 ADAM29Q9UKF5 820 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 CDC14AQ9UNH5 594 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 WDR87Q6ZQQ6 2873 aa16.89■□□□□ 0.29
SDC2-205ENST00000520233 CEP250Q9BV73 2442 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 A0A0A6YYC8 382 aaPredicted RBP16.88■□□□□ 0.29
SDC2-205ENST00000520233 A0A0G2JN53 185 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 H0YIG0 161 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 I3L1I5 382 aaPredicted RBP16.88■□□□□ 0.29
SDC2-205ENST00000520233 NVLO15381 856 aaKnown RBP16.88■□□□□ 0.29
SDC2-205ENST00000520233 KIAA0754O94854 1291 aa16.88■□□□□ 0.29
SDC2-205ENST00000520233 KLHL18O94889 574 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms