RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 MFHAS1Q9Y4C4 1052 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 HYOU1Q9Y4L1 999 aa6.77□□□□□ -1.33
SDCBP-208ENST00000520228 LNP1A1A4G5 178 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 LRRD1A4D1F6 860 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 RNF103O00237 685 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 BCAT2O15382 392 aaPredicted RBP6.76□□□□□ -1.33
SDCBP-208ENST00000520228 PLRG1O43660 514 aaKnown RBP6.76□□□□□ -1.33
SDCBP-208ENST00000520228 IGSF6O95976 241 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 IGHV4-34P06331 123 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 COX7A2P14406 83 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 GNLYP22749 145 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 KDELR1P24390 212 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 PAFAH1B1P43034 410 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 ATXN3P54252 364 aaPredicted RBP6.76□□□□□ -1.33
SDCBP-208ENST00000520228 HADHBP55084 474 aaKnown RBP6.76□□□□□ -1.33
SDCBP-208ENST00000520228 NAP1L1P55209 391 aaKnown RBP6.76□□□□□ -1.33
SDCBP-208ENST00000520228 GSDMDP57764 484 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 RFTN1Q14699 578 aaPredicted RBP6.76□□□□□ -1.33
SDCBP-208ENST00000520228 ANKRD20A8PQ5CZ79 823 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 ZNF805Q5CZA5 627 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 PIP5KL1Q5T9C9 394 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 ATG9BQ674R7 924 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 GDPD4Q6W3E5 623 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 ERN2Q76MJ5 926 aaKnown RBP6.76□□□□□ -1.33
SDCBP-208ENST00000520228 KIAA1328Q86T90 577 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 LRRC49Q8IUZ0 686 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 ZCCHC9Q8N567 271 aaKnown RBP6.76□□□□□ -1.33
SDCBP-208ENST00000520228 ATPAF2Q8N5M1 289 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 C11orf65Q8NCR3 313 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 TMEM163Q8TC26 289 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 SCARB1Q8WTV0 552 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 NSMCE1Q8WV22 266 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 RAPGEF5Q92565 580 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 FAM131CQ96AQ9 280 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 RMDN1Q96DB5 314 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 ZNF599Q96NL3 588 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 FCRL4Q96PJ5 515 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 GTPBP2Q9BX10 602 aaKnown RBP6.76□□□□□ -1.33
SDCBP-208ENST00000520228 MAK16Q9BXY0 300 aaKnown RBP6.76□□□□□ -1.33
SDCBP-208ENST00000520228 POLDIP3Q9BY77 421 aaKnown RBP6.76□□□□□ -1.33
SDCBP-208ENST00000520228 SNTG1Q9NSN8 517 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 LHX3Q9UBR4 397 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 ALG6Q9Y672 507 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 KIAA1549LQ6ZVL6 1849 aa6.76□□□□□ -1.33
SDCBP-208ENST00000520228 C4orf47A7E2U8 309 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 BTNL10A8MVZ5 291 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 ZNF487B1APH4 448 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 B4E171 279 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 SLC30A4O14863 429 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 INSIG1O15503 277 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 LATO43561 262 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 SLC25A17O43808 307 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 UGT2B4P06133 528 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 ADRB3P13945 408 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 EPHA8P29322 1005 aaPredicted RBP6.75□□□□□ -1.33
SDCBP-208ENST00000520228 MAT2AP31153 395 aaKnown RBP6.75□□□□□ -1.33
SDCBP-208ENST00000520228 DCTDP32321 178 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 TSPAN7P41732 249 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 CSNK1EP49674 416 aaKnown RBP6.75□□□□□ -1.33
SDCBP-208ENST00000520228 LIMK1P53667 647 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 TAS2R38P59533 333 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 SLC10A7Q0GE19 358 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 KIF5AQ12840 1032 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 ZNF235Q14590 738 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 PAFAH1B3Q15102 231 aaKnown RBP6.75□□□□□ -1.33
SDCBP-208ENST00000520228 SLC9B1Q4ZJI4 515 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 CFAP58Q5T655 872 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 SERTAD4-AS1Q5TG53 156 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 STPG1Q5TH74 334 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 MARC1Q5VT66 337 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 NCBP2-AS2Q69YL0 99 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 C11orf63Q6NUN7 778 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 NEK5Q6P3R8 708 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 PRPF39Q86UA1 669 aaKnown RBP6.75□□□□□ -1.33
SDCBP-208ENST00000520228 TRIM69Q86WT6 500 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 VSIG1Q86XK7 387 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 TMEM139Q8IV31 216 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 BBS5Q8N3I7 341 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 PQLC3Q8N755 202 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 TEX19Q8NA77 164 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 C7orf57Q8NEG2 295 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.75□□□□□ -1.33
SDCBP-208ENST00000520228 RAB7BQ96AH8 199 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 FAF2Q96CS3 445 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 FEM1CQ96JP0 617 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 SERAC1Q96JX3 654 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 RNF157Q96PX1 679 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 PSKH2Q96QS6 385 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 NR1H4Q96RI1 486 aaPredicted RBP6.75□□□□□ -1.33
SDCBP-208ENST00000520228 EDEM2Q9BV94 578 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 GOLPH3Q9H4A6 298 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 TM9SF3Q9HD45 589 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 TMEM9BQ9NQ34 198 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 SPATS2LQ9NUQ6 558 aaKnown RBP6.75□□□□□ -1.33
SDCBP-208ENST00000520228 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.75□□□□□ -1.33
SDCBP-208ENST00000520228 SLCO1B1Q9Y6L6 691 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 ATG2BQ96BY7 2078 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 CFAP54Q96N23 3096 aa6.75□□□□□ -1.33
SDCBP-208ENST00000520228 SDK1Q7Z5N4 2213 aa6.74□□□□□ -1.33
SDCBP-208ENST00000520228 CEP250Q9BV73 2442 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms