RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 CCDC40Q4G0X9 1142 aa4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 TCEAL6Q6IPX3 200 aa4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 ZNF790Q6PG37 636 aa4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 SMIM29Q86T20 159 aa4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 ADAMTSL2Q86TH1 951 aa4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 ADCK1Q86TW2 530 aa4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 CCDC185Q8N715 623 aa4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 CCNYQ8ND76 341 aa4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 TMEM185AQ8NFB2 350 aa4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 OR2T11Q8NH01 316 aa4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 ZNRF4Q8WWF5 429 aa4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 SUSD6Q92537 303 aa4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 NXPE2Q96DL1 559 aa4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 LURAP1Q96LR2 239 aa4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 NSMCE2Q96MF7 247 aa4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 NKX3-1Q99801 234 aaPredicted RBP4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 ZNF577Q9BSK1 485 aa4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 CCM2Q9BSQ5 444 aa4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 TDRD1Q9BXT4 1180 aaKnown RBP4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 NYXQ9GZU5 481 aa4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 TRPV6Q9H1D0 765 aa4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 ACOXLQ9NUZ1 547 aa4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 TAS2R3Q9NYW6 316 aa4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 KCNG2Q9UJ96 466 aa4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 SATB2Q9UPW6 733 aa4.71□□□□□ -1.66
HMGB1P46-201ENST00000520062 MACROD2A1Z1Q3 448 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 MSGN1A6NI15 193 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 ZNF732B4DXR9 585 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 BMPR1BO00238 502 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 TRIM16O95361 564 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 SEC24AO95486 1093 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 PRSS1P07477 247 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 SFTPBP07988 381 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 SERPINF2P08697 491 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 FAM157CP0CG43 387 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 ERVK-10P10266 1014 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 PRKAR1AP10644 381 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 SKILP12757 684 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 ITGB6P18564 788 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 SLC1A3P43003 542 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 NSFP46459 744 aaKnown RBP4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 OR3A2P47893 321 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 IRX4P78413 519 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 KCNJ10P78508 379 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 FHL1Q13642 323 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 CEACAM7Q14002 265 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 GIT2Q14161 759 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 C12orf60Q5U649 245 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 PLPP4Q5VZY2 271 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 PSRC1Q6PGN9 363 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 SLC25A47Q6Q0C1 308 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 TRMT11Q7Z4G4 463 aaKnown RBP4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 TAF8Q7Z7C8 310 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 ZC3H3Q8IXZ2 948 aaKnown RBP4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 TEX26Q8N6G2 289 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 OR4A16Q8NH70 328 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 SPATA18Q8TC71 538 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 GANCQ8TET4 914 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 GATAD1Q8WUU5 269 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 CASP10Q92851 521 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 C14orf79Q96F83 325 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 SPAG8Q99932 426 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 NTMT1Q9BV86 223 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 NUSAP1Q9BXS6 441 aaKnown RBP4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 KRTAP4-7Q9BYR0 210 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 MARCH7Q9H992 704 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 GPN1Q9HCN4 374 aaPredicted RBP4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 RNF186Q9NXI6 227 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 HACD3Q9P035 362 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 SPASTQ9UBP0 616 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 PSORS1C1Q9UIG5 152 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 EXOC7Q9UPT5 735 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 MRPS2Q9Y399 296 aaKnown RBP4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 SELENOKQ9Y6D0 94 aa4.7□□□□□ -1.66
HMGB1P46-201ENST00000520062 IGKV2D-30A0A075B6S6 120 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 TRBV4-1A0A0J9YWV2 114 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 ATP6V1G1O75348 118 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 SAP30O75446 220 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 MT-ATP6P00846 226 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 GSTA2P09210 222 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 NUDT17P0C025 328 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 CT45A8P0DMV1 189 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 CT45A9P0DMV2 189 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 AADACP22760 399 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 STIP1P31948 543 aaKnown RBP4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 CCKARP32238 428 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 CCR4P51679 360 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 DLX5P56178 289 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 KCNK10P57789 538 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 SSTP61278 116 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 CCZ1BP86790 482 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 CCZ1P86791 482 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 SP3Q02447 781 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 MSLNQ13421 630 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 RBBP5Q15291 538 aaKnown RBP4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 ZNF718Q3SXZ3 478 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 GTDC1Q4AE62 458 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 CT45A2Q5DJT8 189 aa4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 HERC4Q5GLZ8 1057 aaPredicted RBP4.69□□□□□ -1.66
HMGB1P46-201ENST00000520062 PRAMEF7Q5VXH5 474 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms