RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 HMGCLP35914 325 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 TRIM23P36406 574 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 SPAM1P38567 509 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 GNPDA1P46926 289 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 NPY2RP49146 381 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 CCT8P50990 548 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 BLKP51451 505 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 KIAA1024LP59773 190 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 HNRNPKP61978 463 aaKnown RBP eCLIP2.67□□□□□ -1.98
SKP1-204ENST00000517691 TUBB4BP68371 445 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 CRADDP78560 199 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 CDK3Q00526 305 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 CKAP4Q07065 602 aaKnown RBP2.67□□□□□ -1.98
SKP1-204ENST00000517691 DPTQ07507 201 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 C2orf54Q08AI8 447 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 LAMB3Q13751 1172 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 NFATC4Q14934 902 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 CHRNA6Q15825 494 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 NTRK2Q16620 822 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 CDKN3Q16667 212 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 CYP1B1Q16678 543 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 SKIDA1Q1XH10 827 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 PLEKHN1Q494U1 663 aaPredicted RBP2.67□□□□□ -1.98
SKP1-204ENST00000517691 NRN1LQ496H8 165 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 DNTTIP2Q5QJE6 756 aaKnown RBP2.67□□□□□ -1.98
SKP1-204ENST00000517691 ZDHHC20Q5W0Z9 365 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 KCTD11Q693B1 232 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 MACC1Q6ZN28 852 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 LINC00696Q6ZRV3 163 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 DET1Q7L5Y6 550 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 TAF8Q7Z7C8 310 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 CTAGE6Q86UF2 777 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 TAX1BP1Q86VP1 789 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 PARGQ86W56 976 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 RASGRP3Q8IV61 690 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 NAXDQ8IW45 347 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 CTAGE4Q8IX94 777 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 CDH26Q8IXH8 852 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 RBFAQ8N0V3 343 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 TRAM1L1Q8N609 369 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 DEFB124Q8NES8 71 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 SPATA4Q8NEY3 305 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 OR13C4Q8NGS5 318 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 ZNF398Q8TD17 642 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 METTL21AQ8WXB1 218 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 OR1E3Q8WZA6 343 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 CORO2AQ92828 525 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 DCUN1D1Q96GG9 259 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 NAF1Q96HR8 494 aaKnown RBP2.67□□□□□ -1.98
SKP1-204ENST00000517691 DNAJC1Q96KC8 554 aaKnown RBP2.67□□□□□ -1.98
SKP1-204ENST00000517691 WDR92Q96MX6 357 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 SRSF8Q9BRL6 282 aaKnown RBP2.67□□□□□ -1.98
SKP1-204ENST00000517691 ZSCAN5AQ9BUG6 496 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 BTBD2Q9BX70 525 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 CACNG6Q9BXT2 260 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 TEX101Q9BY14 249 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 OR2AG1Q9H205 316 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 TCEAL2Q9H3H9 227 aaPredicted RBP2.67□□□□□ -1.98
SKP1-204ENST00000517691 STN1Q9H668 368 aaKnown RBP2.67□□□□□ -1.98
SKP1-204ENST00000517691 POLR1BQ9H9Y6 1135 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 UGT1A7Q9HAW7 530 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 UGT1A10Q9HAW8 530 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 UGT1A8Q9HAW9 530 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 SCPEP1Q9HB40 452 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 IL26Q9NPH9 171 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 MRPL40Q9NQ50 206 aaKnown RBP2.67□□□□□ -1.98
SKP1-204ENST00000517691 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP2.67□□□□□ -1.98
SKP1-204ENST00000517691 SIRT3Q9NTG7 399 aaPredicted RBP2.67□□□□□ -1.98
SKP1-204ENST00000517691 GIMAP4Q9NUV9 329 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 BFARQ9NZS9 450 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 CNIH4Q9P003 139 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 IL17CQ9P0M4 197 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 SPASTQ9UBP0 616 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 APOBEC3BQ9UH17 382 aaKnown RBP2.67□□□□□ -1.98
SKP1-204ENST00000517691 PADI1Q9ULC6 663 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 SUFUQ9UMX1 484 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 WDR37Q9Y2I8 494 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 NOSIPQ9Y314 301 aaKnown RBP2.67□□□□□ -1.98
SKP1-204ENST00000517691 MAD1L1Q9Y6D9 718 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 SLC30A1Q9Y6M5 507 aa2.67□□□□□ -1.98
SKP1-204ENST00000517691 EP300Q09472 2414 aaPredicted RBP2.67□□□□□ -1.98
SKP1-204ENST00000517691 SPAARA0A1B0GVQ0 90 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 HEATR9A2RTY3 570 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 CPED1A4D0V7 1026 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 EME2A4GXA9 379 aaPredicted RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 MROH6A6NGR9 719 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 OR51F1A6NGY5 319 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 SDR42E2A6NKP2 422 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 FAM171A2A8MVW0 826 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 EFCAB8A8MWE9 144 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 B4DGG1 531 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 CCDC188H7C350 402 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 SLC30A4O14863 429 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 YY2O15391 372 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 FLRT2O43155 660 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 TTI1O43156 1089 aa2.66□□□□□ -1.98
SKP1-204ENST00000517691 PRPF4O43172 522 aaKnown RBP eCLIP2.66□□□□□ -1.98
SKP1-204ENST00000517691 SRP72O76094 671 aaKnown RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 SEC24DO94855 1032 aaPredicted RBP2.66□□□□□ -1.98
SKP1-204ENST00000517691 CDK14O94921 469 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms