RNA–Protein interactions for RNA: ENST00000516989.1

SCARNA6.1-201, small Cajal body-specific RNA 6, humanhuman

BASIC

Gene SCARNA6, Length 238 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleolus, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA6.1-201ENST00000516989 RGS16O15492 202 aaPredicted RBP5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 TAPBPO15533 448 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CCNT2O60583 730 aaKnown RBP5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 SMIM24O75264 130 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 H2AFYO75367 372 aaKnown RBP5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 STK16O75716 305 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 WDR47O94967 919 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 EIF2S1P05198 315 aaKnown RBP5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 NPPBP16860 134 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 KRT4P19013 534 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 TAC1P20366 129 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 PTX3P26022 381 aaPredicted RBP5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 SLC5A2P31639 672 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CRHR1P34998 444 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 ETV5P41161 510 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 HSPA7P48741 367 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 SHC2P98077 582 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CDKL1Q00532 357 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 MC2RQ01718 297 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 ZNF844Q08AG5 666 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 TUBB3Q13509 450 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CASP8Q14790 479 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 NAA25Q14CX7 972 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 RTP5Q14D33 572 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 PDCD1Q15116 288 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 RASA2Q15283 850 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 ZIC1Q15915 447 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CPSF6Q16630 551 aaKnown RBP eCLIP5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 PPP1R3AQ16821 1122 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 PFKFB4Q16877 469 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 ZXDCQ2QGD7 858 aaPredicted RBP5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 DEFB110Q30KQ9 67 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 PTCHD3Q3KNS1 767 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 TECRLQ5HYJ1 363 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CDKL4Q5MAI5 379 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CPZQ66K79 652 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 FCRL6Q6DN72 434 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CYB5D1Q6P9G0 228 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 LCTLQ6UWM7 567 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CEACAM20Q6UY09 585 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 FRMD7Q6ZUT3 714 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CLEC14AQ86T13 490 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CROCCP2Q86T23 111 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 PPP1R3BQ86XI6 285 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 RIBC1Q8N443 379 aaPredicted RBP5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 PTGR2Q8N8N7 351 aaPredicted RBP5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 SNX31Q8N9S9 440 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CCDC63Q8NA47 563 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 MDM1Q8TC05 714 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 MZB1Q8WU39 189 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 SLC5A11Q8WWX8 675 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 NXPE2Q96DL1 559 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CLIP3Q96DZ5 547 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 PHF21BQ96EK2 531 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 SLC41A2Q96JW4 573 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 ATOH8Q96SQ7 321 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 RUFY1Q96T51 708 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 HAUS8Q9BT25 410 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 DPH7Q9BTV6 452 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 TMEM109Q9BVC6 243 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 SGPP1Q9BX95 441 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 PITPNM3Q9BZ71 974 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CD244Q9BZW8 370 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 SLC7A5P2Q9GIP4 190 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 SPRTNQ9H040 489 aaPredicted RBP5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 IQCGQ9H095 443 aaKnown RBP5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CNOT10Q9H9A5 744 aaKnown RBP5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 FANCEQ9HB96 536 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 SLC6A20Q9NP91 592 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 ACSS2Q9NR19 701 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 THSD1Q9NS62 852 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 FGF21Q9NSA1 209 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 TMEM184CQ9NVA4 438 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 SEMA5BQ9P283 1151 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 XPR1Q9UBH6 696 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 PTBP2Q9UKA9 531 aaKnown RBP5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 SNX7Q9UNH6 387 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 PLCL2Q9UPR0 1127 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 BTRCQ9Y297 605 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 ANGPTL3Q9Y5C1 460 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 B3GALT1Q9Y5Z6 326 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 ANKRD12Q6UB98 2062 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 FRYLO94915 3013 aa5.55□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CFAP47Q6ZTR5 3102 aa5.54□□□□□ -1.52
SCARNA6.1-201ENST00000516989 LAMA1P25391 3075 aa5.54□□□□□ -1.52
SCARNA6.1-201ENST00000516989 FEZF1A0PJY2 475 aa5.54□□□□□ -1.52
SCARNA6.1-201ENST00000516989 GOLGA6L10A6NI86 522 aa5.54□□□□□ -1.52
SCARNA6.1-201ENST00000516989 TMEM150CB9EJG8 249 aa5.54□□□□□ -1.52
SCARNA6.1-201ENST00000516989 E7EQ34 232 aa5.54□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CLGNO14967 610 aa5.54□□□□□ -1.52
SCARNA6.1-201ENST00000516989 NVLO15381 856 aaKnown RBP5.54□□□□□ -1.52
SCARNA6.1-201ENST00000516989 HCRTR1O43613 425 aa5.54□□□□□ -1.52
SCARNA6.1-201ENST00000516989 SRPX2O60687 465 aaPredicted RBP5.54□□□□□ -1.52
SCARNA6.1-201ENST00000516989 CTSVO60911 334 aa5.54□□□□□ -1.52
SCARNA6.1-201ENST00000516989 GLRA3O75311 464 aa5.54□□□□□ -1.52
SCARNA6.1-201ENST00000516989 SPAG7O75391 227 aa5.54□□□□□ -1.52
SCARNA6.1-201ENST00000516989 OR2B3O76000 313 aa5.54□□□□□ -1.52
SCARNA6.1-201ENST00000516989 IPO13O94829 963 aaKnown RBP5.54□□□□□ -1.52
SCARNA6.1-201ENST00000516989 KIAA0754O94854 1291 aa5.54□□□□□ -1.52
SCARNA6.1-201ENST00000516989 IL33O95760 270 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 496.5 ms