RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 DOPEY1Q5JWR5 2465 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 TCRBV16S1A1N1A0A5B0 115 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 CLDN1O95832 211 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 SLC35E2BP0CK96 405 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 RNH1P13489 461 aaKnown RBP9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 HNRNPH1P31943 449 aaKnown RBP9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 STX2P32856 288 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 SPRP35270 261 aaPredicted RBP9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 HNF4AP41235 474 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 PLTPP55058 493 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 OR4D2P58180 307 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 SLC26A5P58743 744 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 RAB10P61026 200 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 STXBP1P61764 594 aaKnown RBP9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 NAB1Q13506 487 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 TUBA3CQ13748 450 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 TRADDQ15628 312 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 MEP1AQ16819 746 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 ADPRMQ3LIE5 342 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 KBTBD12Q3ZCT8 623 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 C4orf17Q53FE4 359 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 ACER2Q5QJU3 275 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 GRTP1Q5TC63 336 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 FCRLBQ6BAA4 426 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 HIST2H2BCQ6DN03 193 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 SULT1C3Q6IMI6 304 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 TUBA3EQ6PEY2 450 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 TMIGD1Q6UXZ0 262 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 VN1R5Q7Z5H4 357 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 GPSM1Q86YR5 675 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 CRLF3Q8IUI8 442 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 LGI4Q8N135 537 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 CA13Q8N1Q1 262 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 SUN3Q8TAQ9 357 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 ELP5Q8TE02 316 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 NR4A3Q92570 626 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 KIAA1191Q96A73 305 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 ZNF354BQ96LW1 612 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 CAPS2Q9BXY5 557 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 PITHD1Q9GZP4 211 aaPredicted RBP9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 EHD1Q9H4M9 534 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 NT5DC2Q9H857 520 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 CNOT10Q9H9A5 744 aaKnown RBP9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 KCNK13Q9HB14 408 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 DNAJC11Q9NVH1 559 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 STMN3Q9NZ72 180 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 ABI3Q9P2A4 366 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 PCDHGB6Q9Y5F9 930 aa9.82□□□□□ -0.84
HMGXB3-205ENST00000514469 A1L4Q6 167 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 SAGE2PA6NJ88 616 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 A8MUI8 341 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 MAN1A2O60476 641 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 PRMT3O60678 531 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 PRAMEF4O60810 478 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 B4GALT2O60909 372 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 H2AFYO75367 372 aaKnown RBP9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 CLEC3AO75596 197 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 STK16O75716 305 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 FAM155BO75949 473 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 RASAL1O95294 804 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 TBX6O95947 436 aaPredicted RBP9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 STSP08842 583 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 MAOAP21397 527 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 MAGEA4P43358 317 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 HSPA7P48741 367 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 BTG2P78543 158 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 GUCY2DQ02846 1103 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 ACTN3Q08043 901 aaPredicted RBP9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 E2F2Q14209 437 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 SLMAPQ14BN4 828 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 EFTUD2Q15029 972 aaKnown RBP eCLIP9.81□□□□□ -0.843e-7■■■■□ 20.1
HMGXB3-205ENST00000514469 FBXO48Q5FWF7 155 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 ZNF766Q5HY98 468 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 PRAMEF9Q5VWM5 478 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 CMC1Q7Z7K0 106 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 CCDC25Q86WR0 208 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 CTAGE3PQ8IX95 158 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 KRT78Q8N1N4 520 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 SLC5A8Q8N695 610 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 PPM1NQ8N819 430 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 MDS2Q8NDY4 140 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 DNAJB8Q8NHS0 232 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 FBF1Q8TES7 1133 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 MS4A6EQ96DS6 147 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 WDR34Q96EX3 536 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 PTCD3Q96EY7 689 aaKnown RBP9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 PTCHD1Q96NR3 888 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 SIGLEC12Q96PQ1 595 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 NECTIN3Q9NQS3 549 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 PRDM9Q9NQV7 894 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 NUDT4Q9NZJ9 180 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 PTBP2Q9UKA9 531 aaKnown RBP9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 RNF112Q9ULX5 631 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 OSGIN2Q9Y236 505 aa9.81□□□□□ -0.84
HMGXB3-205ENST00000514469 SPTAN1Q13813 2472 aaKnown RBP9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 TEX15Q9BXT5 2789 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 ESYT3A0FGR9 886 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 LRIT2A6NDA9 550 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 GABRR3A8MPY1 467 aa9.8□□□□□ -0.84
HMGXB3-205ENST00000514469 FAM227AF5H4B4 570 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms