RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 GDF5P43026 501 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 GCGRP47871 477 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 SLC6A12P48065 614 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 ATP4BP51164 291 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 CCR8P51685 355 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 RPS15AP62244 130 aaKnown RBP7.93□□□□□ -1.14
CCL28-204ENST00000514421 DCDP81605 110 aaKnown RBP7.93□□□□□ -1.14
CCL28-204ENST00000514421 MC1RQ01726 317 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 LCP2Q13094 533 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 KLF10Q13118 480 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 SRSF6Q13247 344 aaKnown RBP7.93□□□□□ -1.14
CCL28-204ENST00000514421 DNASE1L3Q13609 305 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 UBAP2LQ14157 1087 aaKnown RBP7.93□□□□□ -1.14
CCL28-204ENST00000514421 PCBP2Q15366 365 aaKnown RBP eCLIP7.93□□□□□ -1.14
CCL28-204ENST00000514421 ARHGAP40Q5TG30 622 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 KANK2Q63ZY3 851 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 NXPE4Q6UWF7 544 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 TTLL10Q6ZVT0 673 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 LARP4Q71RC2 724 aaKnown RBP eCLIP7.93□□□□□ -1.14
CCL28-204ENST00000514421 RNF44Q7L0R7 432 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 PLD3Q8IV08 490 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 CLYBLQ8N0X4 340 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 ARHGAP24Q8N264 748 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 TBC1D19Q8N5T2 526 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 PTGR2Q8N8N7 351 aaPredicted RBP7.93□□□□□ -1.14
CCL28-204ENST00000514421 PDPRQ8NCN5 879 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 RBM15BQ8NDT2 890 aaKnown RBP7.93□□□□□ -1.14
CCL28-204ENST00000514421 CEP70Q8NHQ1 597 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 AGAP11Q8TF27 550 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 UBTD2Q8WUN7 234 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 SLC5A11Q8WWX8 675 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 RERGQ96A58 199 aaPredicted RBP7.93□□□□□ -1.14
CCL28-204ENST00000514421 PHF21BQ96EK2 531 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 MOCOSQ96EN8 888 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 OR4K3Q96R72 315 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 CCT7Q99832 543 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 C17orf62Q9BQA9 187 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 SARGQ9BW04 601 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 ZBTB26Q9HCK0 441 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 CUTCQ9NTM9 273 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 NUDT4Q9NZJ9 180 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 IL17BQ9UHF5 180 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 PCTPQ9UKL6 214 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 PCDHGA6Q9Y5G7 932 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 ZZEF1O43149 2961 aa7.93□□□□□ -1.14
CCL28-204ENST00000514421 WDFY3Q8IZQ1 3526 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 NCF1BA6NI72 391 aaPredicted RBP7.92□□□□□ -1.14
CCL28-204ENST00000514421 ZNF891A8MT65 544 aaPredicted RBP7.92□□□□□ -1.14
CCL28-204ENST00000514421 NCF1CA8MVU1 366 aaPredicted RBP7.92□□□□□ -1.14
CCL28-204ENST00000514421 B2RBV5 119 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 TMEM233B4DJY2 109 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 E2F3O00716 465 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 TERTO14746 1132 aaKnown RBP7.92□□□□□ -1.14
CCL28-204ENST00000514421 HAT1O14929 419 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 DSCR3O14972 297 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 NKX2-8O15522 239 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 LCMT2O60294 686 aaKnown RBP7.92□□□□□ -1.14
CCL28-204ENST00000514421 NRP2O60462 931 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 ONECUT2O95948 504 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 ENO1P06733 434 aaKnown RBP7.92□□□□□ -1.14
CCL28-204ENST00000514421 PRR35P0CG20 571 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 CDH1P12830 882 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 NCF1P14598 390 aaPredicted RBP7.92□□□□□ -1.14
CCL28-204ENST00000514421 GNAZP19086 355 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 WT1P19544 449 aaPredicted RBP7.92□□□□□ -1.14
CCL28-204ENST00000514421 F8A1P23610 371 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 CXCR2P25025 360 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 EPHA3P29320 983 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 PKNOX1P55347 436 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 SNCBQ16143 134 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 PFKFB4Q16877 469 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 MUM1Q2TAK8 710 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 PRTGQ2VWP7 1150 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 C18orf21Q32NC0 220 aaPredicted RBP7.92□□□□□ -1.14
CCL28-204ENST00000514421 CRTC2Q53ET0 693 aaPredicted RBP7.92□□□□□ -1.14
CCL28-204ENST00000514421 CATSPEREQ5SY80 951 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 C1orf189Q5VU69 101 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 GARNL3Q5VVW2 1013 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 MLIPQ5VWP3 458 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 ZNF385CQ66K41 422 aaPredicted RBP7.92□□□□□ -1.14
CCL28-204ENST00000514421 LCN10Q6JVE6 187 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 PGM2L1Q6PCE3 622 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 CSNK1A1LQ8N752 337 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 ENDOVQ8N8Q3 282 aaKnown RBP7.92□□□□□ -1.14
CCL28-204ENST00000514421 MFSD9Q8NBP5 474 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 CAMKVQ8NCB2 501 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 RP9Q8TA86 221 aaKnown RBP7.92□□□□□ -1.14
CCL28-204ENST00000514421 CT55Q8WUE5 264 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 SLC13A3Q8WWT9 602 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 NEIL2Q969S2 332 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 TM4SF19Q96DZ7 209 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 GBP5Q96PP8 586 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 ZNF382Q96SR6 550 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 AIF1LQ9BQI0 150 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 NLNQ9BYT8 704 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 NUF2Q9BZD4 464 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 CD244Q9BZW8 370 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 WDR55Q9H6Y2 383 aaPredicted RBP7.92□□□□□ -1.14
CCL28-204ENST00000514421 PELI2Q9HAT8 420 aa7.92□□□□□ -1.14
CCL28-204ENST00000514421 DNAJC11Q9NVH1 559 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms