RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 UGDHO60701 494 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 CLEC3AO75596 197 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 KLHL18O94889 574 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 MLYCDO95822 493 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 PDYNP01213 254 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 HBQ1P09105 142 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 NEFHP12036 1026 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 CHN1P15882 459 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 FBLP22087 321 aaKnown RBP9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 CERS1P27544 350 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 HMOX2P30519 316 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 ARSFP54793 590 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 PCDH1Q08174 1060 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 DNASE1L3Q13609 305 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 PWP1Q13610 501 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 RCN2Q14257 317 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 GGTA1PQ4G0N0 100 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 NKAIN1Q4KMZ8 207 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 ARL13AQ5H913 290 aaPredicted RBP9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 MANEAQ5SRI9 462 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 MLIPQ5VWP3 458 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 FRG2Q64ET8 278 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 CUZD1Q86UP6 607 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 ENDOVQ8N8Q3 282 aaKnown RBP9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 AMER3Q8N944 861 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 TRPV3Q8NET8 790 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 PROKR1Q8TCW9 393 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 SELENOMQ8WWX9 145 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 GAL3ST3Q96A11 431 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 COL26A1Q96A83 441 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 MS4A6EQ96DS6 147 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 MMABQ96EY8 250 aaPredicted RBP9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 CRELD1Q96HD1 420 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 FRG2BQ96QU4 278 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 YIPF2Q9BWQ6 316 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 B3GNT4Q9C0J1 378 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 RHBGQ9H310 441 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 ELOVL6Q9H5J4 265 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 NT5DC2Q9H857 520 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 NKIRAS1Q9NYS0 192 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 IFT80Q9P2H3 777 aaPredicted RBP9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 NAALAD2Q9Y3Q0 740 aa9.3□□□□□ -0.92
TOPBP1-209ENST00000513818 LRIT2A6NDA9 550 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 MANBAO00462 879 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 TXNDC9O14530 226 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 NPHS1O60500 1241 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 JRKO75564 520 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 CRCPO75575 148 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 ESRRBO95718 433 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 KLK3P07288 261 aaPredicted RBP9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 SERPINA6P08185 405 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 CCNYL3P0C7X3 344 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 ALOX12P18054 663 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 TCN2P20062 427 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 PKNOX1P55347 436 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 BTN3A2P78410 334 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 DCDP81605 110 aaKnown RBP9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 ABHD18Q0P651 414 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 BST1Q10588 318 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 ASPHQ12797 758 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 IFT88Q13099 833 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 MAP7Q14244 749 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 NCF4Q15080 339 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 NDUFA9Q16795 377 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 FAM214AQ32MH5 1076 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 SH2D4BQ5SQS7 431 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 ATP1A1-AS1Q5TC04 95 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 YOD1Q5VVQ6 348 aaPredicted RBP9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 GARNL3Q5VVW2 1013 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 DMRTA1Q5VZB9 504 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 ZNF793Q6ZN11 406 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 UBE3DQ7Z6J8 389 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 AFAP1L2Q8N4X5 818 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 TTLQ8NG68 377 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 OR6Y1Q8NGX8 325 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 METTL6Q8TCB7 284 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 UBE2E3Q969T4 207 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 LRFN5Q96NI6 719 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 MESP1Q9BRJ9 268 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 C20orf27Q9GZN8 174 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 PITHD1Q9GZP4 211 aaPredicted RBP9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 REXO4Q9GZR2 422 aaKnown RBP9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 SOX17Q9H6I2 414 aaPredicted RBP9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 GPN2Q9H9Y4 310 aaPredicted RBP9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 CPNE5Q9HCH3 593 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 ANKHQ9HCJ1 492 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 ZNF304Q9HCX3 659 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 ENAMQ9NRM1 1142 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 TRPC4Q9UBN4 977 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 PADI1Q9ULC6 663 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 PCDHGA11Q9Y5H2 935 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 PCSK5Q92824 1860 aa9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 MAP1BP46821 2468 aaKnown RBP9.29□□□□□ -0.92
TOPBP1-209ENST00000513818 NUP210LQ5VU65 1888 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 CCDC88CQ9P219 2028 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 ARHGAP10A1A4S6 786 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 OR2W5A6NFC9 320 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 C9J4A7 227 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 PLPP1O14494 284 aa9.28□□□□□ -0.92
TOPBP1-209ENST00000513818 TERTO14746 1132 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms