RNA–Protein interactions for RNA: ENST00000511859.5

RNF4-216, Transcript of ring finger protein 4, humanhuman

TSL 1 (best) BASIC

Gene RNF4, Length 1,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-216ENST00000511859 SKP1P63208 163 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 GBX1Q14549 363 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 HERC3Q15034 1050 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 TYSND1Q2T9J0 566 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 EEF1AKMT2Q5JPI9 291 aaKnown RBP10.77□□□□□ -0.69
RNF4-216ENST00000511859 CATSPEREQ5SY80 951 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 NIPAL1Q6NVV3 410 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 PRSS57Q6UWY2 283 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 TRILQ7L0X0 811 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 LDB1Q86U70 411 aaPredicted RBP10.77□□□□□ -0.69
RNF4-216ENST00000511859 KIF18BQ86Y91 864 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 PDSS2Q86YH6 399 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 GPALPP1Q8IXQ4 340 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 LRRC75A-AS1Q8N1F1 130 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 C17orf53Q8N3J3 647 aaPredicted RBP10.77□□□□□ -0.69
RNF4-216ENST00000511859 TXLNBQ8N3L3 684 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 OR2M7Q8NG81 312 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 OR52K1Q8NGK4 314 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 ZNF480Q8WV37 535 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 ZNF778Q96MU6 729 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 PTCHD1Q96NR3 888 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 PKP4Q99569 1192 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 SH3GL2Q99962 352 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 MACROD1Q9BQ69 325 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 OSBPL8Q9BZF1 889 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 ALKBH4Q9NXW9 302 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 KCMF1Q9P0J7 381 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 ERVK-11Q9UQG0 969 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 YARS2Q9Y2Z4 477 aaKnown RBP10.77□□□□□ -0.69
RNF4-216ENST00000511859 PCDHGB3Q9Y5G1 929 aa10.77□□□□□ -0.69
RNF4-216ENST00000511859 ERI2A8K979 691 aaKnown RBP10.76□□□□□ -0.69
RNF4-216ENST00000511859 FAM166BA8MTA8 275 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 A8MVJ9 347 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 H7C1Q1 480 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 NDUFS3O75489 264 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 GLSO94925 669 aaPredicted RBP10.76□□□□□ -0.69
RNF4-216ENST00000511859 TJP3O95049 919 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 SLC16A8O95907 504 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 STATHP02808 62 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 TACR1P25103 407 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 MARCKSL1P49006 195 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 MAN2A2P49641 1150 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 SSR4P51571 173 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 Q5PR19 223 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 THEMIS2Q5TEJ8 643 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 QSOX2Q6ZRP7 698 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 GK5Q6ZS86 529 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 CXorf67Q86X51 503 aaPredicted RBP10.76□□□□□ -0.69
RNF4-216ENST00000511859 REXO1L1PQ8IX06 675 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 CIARTQ8N365 385 aaPredicted RBP10.76□□□□□ -0.69
RNF4-216ENST00000511859 MPP5Q8N3R9 675 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 FAM109AQ8N4B1 249 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 KCT2Q8NC54 265 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 APCDD1LQ8NCL9 501 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 PPFIBP2Q8ND30 876 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 ZCCHC10Q8TBK6 192 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 SLC13A3Q8WWT9 602 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 FAM118BQ9BPY3 351 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 RBCK1Q9BYM8 510 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 TTTY12Q9BZ98 90 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 ATG10Q9H0Y0 220 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 LDAHQ9H6V9 325 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 HPF1Q9NWY4 346 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 ZNF629Q9UEG4 869 aaPredicted RBP10.76□□□□□ -0.69
RNF4-216ENST00000511859 MTRF1LQ9UGC7 380 aaKnown RBP10.76□□□□□ -0.69
RNF4-216ENST00000511859 FBXW2Q9UKT8 454 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 PCDHA3Q9Y5H8 950 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 CAPN6Q9Y6Q1 641 aa10.76□□□□□ -0.69
RNF4-216ENST00000511859 TRBV11-1A0A0K0K1C0 115 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 GRID2IPA4D2P6 1211 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 PINLYPA6NC86 204 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 CLCA1A8K7I4 914 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 BTNL10A8MVZ5 291 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 CES2O00748 559 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 ZSCAN12O43309 604 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 FTCDO95954 541 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 CNR1P21554 472 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 PTPN7P35236 360 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 CETN2P41208 172 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 SLC10A1Q14973 349 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 KLHL38Q2WGJ6 581 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 ASPGQ86U10 573 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 SLC26A11Q86WA9 606 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 LRRC56Q8IYG6 542 aaPredicted RBP10.75□□□□□ -0.69
RNF4-216ENST00000511859 FAM71DQ8N9W8 422 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 RELL2Q8NC24 303 aaPredicted RBP10.75□□□□□ -0.69
RNF4-216ENST00000511859 FBXO15Q8NCQ5 510 aaPredicted RBP10.75□□□□□ -0.69
RNF4-216ENST00000511859 ARMC2Q8NEN0 867 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 B3GNT7Q8NFL0 401 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 KRT35Q92764 455 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 SLCO2A1Q92959 643 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 TRIM44Q96DX7 344 aaPredicted RBP10.75□□□□□ -0.69
RNF4-216ENST00000511859 CCDC138Q96M89 665 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 SECISBP2Q96T21 854 aaKnown RBP10.75□□□□□ -0.69
RNF4-216ENST00000511859 PIP5K1AQ99755 562 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 TSGA10Q9BZW7 698 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 IL1RL2Q9HB29 575 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 ABCF3Q9NUQ8 709 aa10.75□□□□□ -0.69
RNF4-216ENST00000511859 MARCH4Q9P2E8 410 aaPredicted RBP10.75□□□□□ -0.69
RNF4-216ENST00000511859 NINQ8N4C6 2090 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms