RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 OR1D2P34982 312 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 RBMXP38159 391 aaKnown RBP3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 LEPRP48357 1165 aaKnown RBP3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 ARCN1P48444 511 aaKnown RBP3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 SLC26A2P50443 739 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 NLRP11P59045 1033 aaKnown RBP3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 PLIN5Q00G26 463 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 IL9RQ01113 521 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 ELAVL2Q12926 359 aaKnown RBP3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 UBE2V1Q13404 147 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 CDC37Q16543 378 aaPredicted RBP3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 C14orf28Q4W4Y0 310 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 SBK1Q52WX2 424 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 BMP2KLQ5H9B9 411 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 IRAK1BP1Q5VVH5 260 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 ZDHHC20Q5W0Z9 365 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 GPR139Q6DWJ6 353 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 WBP2NLQ6ICG8 309 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 OR7E24Q6IFN5 339 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 KRTAP5-4Q6L8H1 288 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 KRTAP5-1Q6L8H4 278 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 ZNF771Q7L3S4 317 aaPredicted RBP3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 CEP57Q86XR8 500 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 DNAAF5Q86Y56 855 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 GALNT13Q8IUC8 556 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 CTAGE4Q8IX94 777 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 OR8H2Q8N162 312 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 RFLNBQ8N5W9 214 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 METTL13Q8N6R0 699 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 SYT2Q8N9I0 419 aaPredicted RBP3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 POC1AQ8NBT0 407 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 CHDHQ8NE62 594 aaPredicted RBP3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 PTPMT1Q8WUK0 201 aaPredicted RBP3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 TMEM255BQ8WV15 326 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 SECTM1Q8WVN6 248 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 NDRG1Q92597 394 aaKnown RBP3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 PHF21AQ96BD5 680 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 LRRC3BQ96PB8 259 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 GCNAQ96QF7 691 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 SLC22A12Q96S37 553 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 LZTS2Q9BRK4 669 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 HGH1Q9BTY7 390 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 CENPOQ9BU64 300 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 POLR3CQ9BUI4 534 aaPredicted RBP3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 MRPL1Q9BYD6 325 aaKnown RBP3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 KCNK15Q9H427 330 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 RETREG1Q9H6L5 497 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 HPS4Q9NQG7 708 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 GKN1Q9NS71 199 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 ECHDC1Q9NTX5 307 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 SEPT10Q9P0V9 454 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 MARCH4Q9P2E8 410 aaPredicted RBP3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 ZNF148Q9UQR1 794 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 PIN4Q9Y237 131 aaKnown RBP3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 ZNF711Q9Y462 761 aa3.33□□□□□ -1.88
TOPBP1-208ENST00000511439 PTPRDP23468 1912 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 MYLKQ15746 1914 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 CUBNO60494 3623 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 RTTNQ86VV8 2226 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 FLNAP21333 2647 aaKnown RBP3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 LOC102723996A0A087X1L8 192 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 OR2M5A3KFT3 312 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 C5orf60A6NFR6 353 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 RNF212BA8MTL3 300 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 ANKRD66B4E2M5 251 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 TMEM178BH3BS89 294 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 EIF3DO15371 548 aaKnown RBP eCLIP3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 P4HA2O15460 535 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 NDUFS4O43181 175 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 PLOD3O60568 738 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 CSO75390 466 aaKnown RBP3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 KLF8O95600 359 aaPredicted RBP3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 PLGP00747 810 aaPredicted RBP3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 TPOP07202 933 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 CKMT2P17540 419 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 GABRG2P18507 467 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 DGKAP23743 735 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 NR2F2P24468 414 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 ACP1P24666 158 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 TMOD1P28289 359 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 NMBRP28336 390 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 AHRP35869 848 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 ARSEP51690 589 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 SIRPAP78324 504 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 GAGE2BQ13066 116 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 PDGFRLQ15198 375 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 ZNF718Q3SXZ3 478 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 ZNF672Q499Z4 452 aaPredicted RBP3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 GAGE2EQ4V326 116 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 STXBP5Q5T5C0 1151 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 GAGE2AQ6NT46 116 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 FBXL22Q6P050 247 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 FOXL2NBQ6ZUU3 175 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 PLEKHM3Q6ZWE6 761 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 INTS8Q75QN2 995 aaKnown RBP3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 KRT74Q7RTS7 529 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 PLPPR4Q7Z2D5 763 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 DSG4Q86SJ6 1040 aa3.32□□□□□ -1.88
TOPBP1-208ENST00000511439 LDB1Q86U70 411 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms