RNA–Protein interactions for RNA: ENST00000510626.5

HTT-208, Transcript of huntingtin, humanhuman

TSL 1 (best)

Gene HTT, Length 14,438 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-208ENST00000510626 PRKXP51817 358 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 ART1P52961 327 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 ARL9Q6T311 187 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 C12orf45Q8N5I9 185 aaPredicted RBP8.11□□□□□ -1.11
HTT-208ENST00000510626 TFAP2CQ92754 450 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 SNAPC3Q92966 411 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 FBXL8Q96CD0 374 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 ZBTB45Q96K62 511 aaPredicted RBP8.11□□□□□ -1.11
HTT-208ENST00000510626 KATNBL1Q9H079 304 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 SNRNP200O75643 2136 aaKnown RBP8.11□□□□□ -1.11
HTT-208ENST00000510626 WNT9AO14904 365 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 TPT1P13693 172 aaKnown RBP8.11□□□□□ -1.11
HTT-208ENST00000510626 BMP8BP34820 402 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 HERV-K104P61576 105 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 FGL2Q14314 439 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 AADACL4Q5VUY2 407 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 BMP8AQ7Z5Y6 402 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 NXPE1Q8N323 547 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 EBF4Q9BQW3 602 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 ELAC1Q9H777 363 aaKnown RBP8.11□□□□□ -1.11
HTT-208ENST00000510626 F5H0A9 414 aaPredicted RBP8.11□□□□□ -1.11
HTT-208ENST00000510626 ERAL1O75616 437 aaKnown RBP8.11□□□□□ -1.11
HTT-208ENST00000510626 ITGAMP11215 1152 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 ITPKAP23677 461 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 DLSTP36957 453 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 RCAN2Q14206 197 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 GAREM2Q75VX8 874 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 FZD4Q9ULV1 537 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 EME2A4GXA9 379 aaPredicted RBP8.11□□□□□ -1.11
HTT-208ENST00000510626 MATN4O95460 622 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 PPP3CBP16298 524 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 OR2M2Q96R28 347 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 ARL6Q9H0F7 186 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 UFSP2Q9NUQ7 469 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 ANKMY1Q9P2S6 941 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 A0A0D9SG52 128 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 SCGB2A1O75556 95 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 AK1P00568 194 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 F10P00742 488 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 HDCP19113 662 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 HNRNPA0Q13151 305 aaKnown RBP8.11□□□□□ -1.11
HTT-208ENST00000510626 UBXN11Q5T124 520 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 SLC27A4Q6P1M0 643 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 ISLR2Q6UXK2 745 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 RFPL4BQ6ZWI9 263 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 CILP2Q8IUL8 1156 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 NDNFQ8TB73 568 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 CNOT9Q92600 299 aaKnown RBP8.11□□□□□ -1.11
HTT-208ENST00000510626 COQ10AQ96MF6 247 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 CCM2Q9BSQ5 444 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 CHIAQ9BZP6 476 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 SIX2Q9NPC8 291 aa8.11□□□□□ -1.11
HTT-208ENST00000510626 WASHC1A8K0Z3 465 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 WASH3PC4AMC7 463 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 ICAM3P32942 547 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 RBMXP38159 391 aaKnown RBP8.1□□□□□ -1.11
HTT-208ENST00000510626 CLCN7P51798 805 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 DCAF12L1Q5VU92 463 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 WASH2PQ6VEQ5 465 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 SECISBP2Q96T21 854 aaKnown RBP8.1□□□□□ -1.11
HTT-208ENST00000510626 A0A1W2PPW3 197 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 EIF3FO00303 357 aaPredicted RBP8.1□□□□□ -1.11
HTT-208ENST00000510626 ARF3P61204 181 aaPredicted RBP8.1□□□□□ -1.11
HTT-208ENST00000510626 ARF1P84077 181 aaKnown RBP8.1□□□□□ -1.11
HTT-208ENST00000510626 DUSP4Q13115 394 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 DSC3Q14574 896 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 CEP97Q8IW35 865 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 YIPF7Q8N8F6 280 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 HEPHQ9BQS7 1158 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 CNOT2Q9NZN8 540 aaKnown RBP8.1□□□□□ -1.11
HTT-208ENST00000510626 TOR1AO14656 332 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 RGS11O94810 467 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 CDK6Q00534 326 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 MFSD3Q96ES6 412 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 ABCB8Q9NUT2 735 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 WASF3Q9UPY6 502 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 ENDOD1O94919 500 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 HOXC12P31275 282 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 ZNF565Q8N9K5 539 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 ZSCAN1Q8NBB4 408 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 PROKR2Q8NFJ6 384 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 MFSD8Q8NHS3 518 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 CNTNAP3BQ96NU0 1288 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 OR14A2Q96R54 314 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 HMX3A6NHT5 357 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 MANBAO00462 879 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 SMIM10L2AP0DMW4 78 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 SMIM10L2BP0DMW5 78 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 MTPNP58546 118 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 PAFAH1B3Q15102 231 aaKnown RBP8.1□□□□□ -1.11
HTT-208ENST00000510626 LIPJQ5W064 366 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 STEAP4Q687X5 459 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 SERPINA9Q86WD7 417 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 OR6K6Q8NGW6 343 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 FAM118AQ9NWS6 357 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 ABCC6O95255 1503 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 FAM230AA0A1W2PPH8 454 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 SLC1A7O00341 560 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 CTSEP14091 401 aa8.1□□□□□ -1.11
HTT-208ENST00000510626 PXKQ7Z7A4 578 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms