RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 CLDN9O95484 217 aa16.32■□□□□ 0.2
CLDND1-221ENST00000510541 IL1RNP18510 177 aa16.32■□□□□ 0.2
CLDND1-221ENST00000510541 KRT15P19012 456 aa16.32■□□□□ 0.2
CLDND1-221ENST00000510541 JAK1P23458 1154 aa16.32■□□□□ 0.2
CLDND1-221ENST00000510541 EEF1DP29692 281 aaKnown RBP16.32■□□□□ 0.2
CLDND1-221ENST00000510541 DNAJB13P59910 316 aa16.32■□□□□ 0.2
CLDND1-221ENST00000510541 PHEXP78562 749 aa16.32■□□□□ 0.2
CLDND1-221ENST00000510541 AIMP2Q13155 320 aaKnown RBP16.32■□□□□ 0.2
CLDND1-221ENST00000510541 RCN2Q14257 317 aa16.32■□□□□ 0.2
CLDND1-221ENST00000510541 TRIM40Q6P9F5 258 aa16.32■□□□□ 0.2
CLDND1-221ENST00000510541 ABHD17CQ6PCB6 329 aa16.32■□□□□ 0.2
CLDND1-221ENST00000510541 CHSY3Q70JA7 882 aa16.32■□□□□ 0.2
CLDND1-221ENST00000510541 TRABD2AQ86V40 505 aa16.32■□□□□ 0.2
CLDND1-221ENST00000510541 CYP4X1Q8N118 509 aa16.32■□□□□ 0.2
CLDND1-221ENST00000510541 WDR20Q8TBZ3 569 aa16.32■□□□□ 0.2
CLDND1-221ENST00000510541 PHF21BQ96EK2 531 aa16.32■□□□□ 0.2
CLDND1-221ENST00000510541 QRFPRQ96P65 431 aa16.32■□□□□ 0.2
CLDND1-221ENST00000510541 KCNC2Q96PR1 638 aa16.32■□□□□ 0.2
CLDND1-221ENST00000510541 SMAD5Q99717 465 aaKnown RBP16.32■□□□□ 0.2
CLDND1-221ENST00000510541 AICDAQ9GZX7 198 aa16.32■□□□□ 0.2
CLDND1-221ENST00000510541 ACTR8Q9H981 624 aa16.32■□□□□ 0.2
CLDND1-221ENST00000510541 ZBTB26Q9HCK0 441 aa16.32■□□□□ 0.2
CLDND1-221ENST00000510541 TBK1Q9UHD2 729 aa16.32■□□□□ 0.2
CLDND1-221ENST00000510541 MED13Q9UHV7 2174 aa16.32■□□□□ 0.2
CLDND1-221ENST00000510541 C3orf18Q9UK00 162 aa16.32■□□□□ 0.2
CLDND1-221ENST00000510541 A0A1W2PPM1 405 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 OR7A17O14581 309 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 DLX3O60479 287 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 SEMA3DO95025 777 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 SIX3O95343 332 aaPredicted RBP16.31■□□□□ 0.2
CLDND1-221ENST00000510541 MLYCDO95822 493 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 HPP00738 406 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 ZNF888P0CJ79 500 aaPredicted RBP16.31■□□□□ 0.2
CLDND1-221ENST00000510541 ICAM2P13598 275 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 PTX3P26022 381 aaPredicted RBP16.31■□□□□ 0.2
CLDND1-221ENST00000510541 HNRNPH1P31943 449 aaKnown RBP16.31■□□□□ 0.2
CLDND1-221ENST00000510541 DEKP35659 375 aaKnown RBP16.31■□□□□ 0.2
CLDND1-221ENST00000510541 EMP2P54851 167 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 SNRPNP63162 240 aaKnown RBP16.31■□□□□ 0.2
CLDND1-221ENST00000510541 TRAF3Q13114 568 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 DEFB134Q4QY38 66 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 VWA2Q5GFL6 755 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 TNFAIP8L3Q5GJ75 292 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 ZNF678Q5SXM1 525 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 DEPDC1Q5TB30 811 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 ATP1A1-AS1Q5TC04 95 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 QSOX2Q6ZRP7 698 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 RIPOR1Q6ZS17 1223 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 PRSS41Q7RTY9 318 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 OR11G2Q8NGC1 345 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 EPS8L3Q8TE67 593 aaKnown RBP16.31■□□□□ 0.2
CLDND1-221ENST00000510541 TBC1D20Q96BZ9 403 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 SERINC2Q96SA4 455 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 ZNF382Q96SR6 550 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 LYRM4Q9HD34 91 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 ATP13A2Q9NQ11 1180 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 PRDM7Q9NQW5 492 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 ACSS2Q9NR19 701 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 LANCL2Q9NS86 450 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 G3BP2Q9UN86 482 aaKnown RBP16.31■□□□□ 0.2
CLDND1-221ENST00000510541 MMACHCQ9Y4U1 282 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 BOD1L1Q8NFC6 3051 aa16.31■□□□□ 0.2
CLDND1-221ENST00000510541 SMG1Q96Q15 3661 aaKnown RBP16.31■□□□□ 0.2
CLDND1-221ENST00000510541 SERTM1A2A2V5 107 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 MAGEB17A8MXT2 336 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 PLIN3O60664 434 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 PROCP04070 461 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 RNH1P13489 461 aaKnown RBP16.3■□□□□ 0.2
CLDND1-221ENST00000510541 KRT4P19013 534 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 XCR1P46094 333 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 CCNG1P51959 295 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 MTTPP55157 894 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 IFFO1Q0D2I5 559 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 BIKQ13323 160 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 ATP1A4Q13733 1029 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 FBXO48Q5FWF7 155 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 IGFL3Q6UXB1 125 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 ZYG11AQ6WRX3 759 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 ZCCHC7Q8N3Z6 543 aaKnown RBP16.3■□□□□ 0.2
CLDND1-221ENST00000510541 DTWD1Q8N5C7 304 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 CLEC1AQ8NC01 280 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 RNF31Q96EP0 1072 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 FAR2Q96K12 515 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 MACROD1Q9BQ69 325 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 CENPKQ9BS16 269 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 VN1R1Q9GZP7 353 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 ZNF700Q9H0M5 742 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 NOL11Q9H8H0 719 aaKnown RBP16.3■□□□□ 0.2
CLDND1-221ENST00000510541 BRF2Q9HAW0 419 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 SSU72Q9NP77 194 aaKnown RBP16.3■□□□□ 0.2
CLDND1-221ENST00000510541 PRDM9Q9NQV7 894 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 C19orf25Q9UFG5 118 aaPredicted RBP16.3■□□□□ 0.2
CLDND1-221ENST00000510541 TRPS1Q9UHF7 1281 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 EMCNQ9ULC0 261 aa16.3■□□□□ 0.2
CLDND1-221ENST00000510541 G3V2L1 256 aa16.29■□□□□ 0.2
CLDND1-221ENST00000510541 SGK494L7N484 410 aa16.29■□□□□ 0.2
CLDND1-221ENST00000510541 ERI3O43414 337 aaKnown RBP16.29■□□□□ 0.2
CLDND1-221ENST00000510541 CHST10O43529 356 aa16.29■□□□□ 0.2
CLDND1-221ENST00000510541 ALOX12BO75342 701 aa16.29■□□□□ 0.2
CLDND1-221ENST00000510541 HEXBP07686 556 aa16.29■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms