RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 TCRBV16S1A1N1A0A5B0 115 aa14.87□□□□□ -0.03
RAB40C-202ENST00000509637 SLC16A5O15375 505 aa14.87□□□□□ -0.03
RAB40C-202ENST00000509637 TBX6O95947 436 aaPredicted RBP14.87□□□□□ -0.03
RAB40C-202ENST00000509637 C8GP07360 202 aa14.87□□□□□ -0.03
RAB40C-202ENST00000509637 ABOP16442 354 aa14.87□□□□□ -0.03
RAB40C-202ENST00000509637 SSTR2P30874 369 aa14.87□□□□□ -0.03
RAB40C-202ENST00000509637 MEOX1P50221 254 aa14.87□□□□□ -0.03
RAB40C-202ENST00000509637 HLCSP50747 726 aa14.87□□□□□ -0.03
RAB40C-202ENST00000509637 SARNPP82979 210 aaKnown RBP14.87□□□□□ -0.03
RAB40C-202ENST00000509637 TLE4Q04727 773 aa14.87□□□□□ -0.03
RAB40C-202ENST00000509637 TFF3Q07654 80 aa14.87□□□□□ -0.03
RAB40C-202ENST00000509637 RUNX2Q13950 521 aa14.87□□□□□ -0.03
RAB40C-202ENST00000509637 CRYMQ14894 314 aa14.87□□□□□ -0.03
RAB40C-202ENST00000509637 HERC3Q15034 1050 aa14.87□□□□□ -0.03
RAB40C-202ENST00000509637 C18orf21Q32NC0 220 aaPredicted RBP14.87□□□□□ -0.03
RAB40C-202ENST00000509637 RNASEH2BQ5TBB1 312 aaKnown RBP14.87□□□□□ -0.03
RAB40C-202ENST00000509637 DUPD1Q68J44 220 aa14.87□□□□□ -0.03
RAB40C-202ENST00000509637 CEP97Q8IW35 865 aa14.87□□□□□ -0.03
RAB40C-202ENST00000509637 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.87□□□□□ -0.03
RAB40C-202ENST00000509637 OR52N2Q8NGI0 321 aa14.87□□□□□ -0.03
RAB40C-202ENST00000509637 CREB3L4Q8TEY5 395 aa14.87□□□□□ -0.03
RAB40C-202ENST00000509637 UCK2Q9BZX2 261 aa14.87□□□□□ -0.03
RAB40C-202ENST00000509637 SLC6A16Q9GZN6 736 aa14.87□□□□□ -0.03
RAB40C-202ENST00000509637 LIN28AQ9H9Z2 209 aaKnown RBP14.87□□□□□ -0.03
RAB40C-202ENST00000509637 ZFATQ9P243 1243 aa14.87□□□□□ -0.03
RAB40C-202ENST00000509637 SAGE2PA6NJ88 616 aa14.86□□□□□ -0.03
RAB40C-202ENST00000509637 HS6ST1O60243 411 aa14.86□□□□□ -0.03
RAB40C-202ENST00000509637 SERPIND1P05546 499 aa14.86□□□□□ -0.03
RAB40C-202ENST00000509637 SLC35G6P0C7Q6 338 aa14.86□□□□□ -0.03
RAB40C-202ENST00000509637 IL10P22301 178 aa14.86□□□□□ -0.03
RAB40C-202ENST00000509637 CCR8P51685 355 aa14.86□□□□□ -0.03
RAB40C-202ENST00000509637 REEP5Q00765 189 aa14.86□□□□□ -0.03
RAB40C-202ENST00000509637 SP140Q13342 867 aa14.86□□□□□ -0.03
RAB40C-202ENST00000509637 PWP1Q13610 501 aa14.86□□□□□ -0.03
RAB40C-202ENST00000509637 TRMT10BQ6PF06 316 aaKnown RBP14.86□□□□□ -0.03
RAB40C-202ENST00000509637 SBSNQ6UWP8 590 aa14.86□□□□□ -0.03
RAB40C-202ENST00000509637 MEX3BQ6ZN04 569 aaKnown RBP14.86□□□□□ -0.03
RAB40C-202ENST00000509637 QSOX2Q6ZRP7 698 aa14.86□□□□□ -0.03
RAB40C-202ENST00000509637 CA13Q8N1Q1 262 aa14.86□□□□□ -0.03
RAB40C-202ENST00000509637 FBXL8Q96CD0 374 aa14.86□□□□□ -0.03
RAB40C-202ENST00000509637 TSNARE1Q96NA8 513 aa14.86□□□□□ -0.03
RAB40C-202ENST00000509637 PLSCR2Q9NRY7 297 aa14.86□□□□□ -0.03
RAB40C-202ENST00000509637 ZFP69BQ9UJL9 534 aa14.86□□□□□ -0.03
RAB40C-202ENST00000509637 PPT2Q9UMR5 302 aa14.86□□□□□ -0.03
RAB40C-202ENST00000509637 SETD2Q9BYW2 2564 aaPredicted RBP14.85□□□□□ -0.03
RAB40C-202ENST00000509637 A0A0G2JMM0 328 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 A0A0G2JN53 185 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 MYOCOSA0A1B0GUC4 107 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 A0A1W2PPB8 328 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 A0A1W2PRS3 328 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 NKX2-6A6NCS4 301 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 KIR3DP1A8MWS1 328 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 PRMT3O60678 531 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 ZNF354AO60765 605 aaPredicted RBP14.85□□□□□ -0.03
RAB40C-202ENST00000509637 PRAMEF4O60810 478 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 PDE9AO76083 593 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 GUCA1CO95843 209 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 ZNF24P17028 368 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 IVDP26440 423 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 CYB561P49447 251 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 TAS2R50P59544 299 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 GPR85P60893 370 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 CCZ1BP86790 482 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 CCZ1P86791 482 aaPredicted RBP14.85□□□□□ -0.03
RAB40C-202ENST00000509637 PPP1R3AQ16821 1122 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 XKR6Q5GH73 641 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 TEDDM1Q5T9Z0 273 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 PRAMEF9Q5VWM5 478 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 CCDC137Q6PK04 289 aaKnown RBP14.85□□□□□ -0.03
RAB40C-202ENST00000509637 CEP128Q6ZU80 1094 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 STRA8Q7Z7C7 330 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 CD163Q86VB7 1156 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 CNTN4Q8IWV2 1026 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 LMNTD2Q8IXW0 634 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 C16orf52Q8NHV5 167 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 FAM57AQ8TBR7 257 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 CALML6Q8TD86 181 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 SREK1Q8WXA9 508 aaKnown RBP14.85□□□□□ -0.03
RAB40C-202ENST00000509637 NRGNQ92686 78 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 HAUS8Q9BT25 410 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 RHBGQ9H310 441 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 MCCC2Q9HCC0 563 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 GPAMQ9HCL2 828 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 HOMER3Q9NSC5 361 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 ARL15Q9NXU5 204 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 TAS2R13Q9NYV9 303 aa14.85□□□□□ -0.03
RAB40C-202ENST00000509637 PRRC2AP48634 2157 aaKnown RBP14.85□□□□□ -0.03
RAB40C-202ENST00000509637 MTORP42345 2549 aa14.84□□□□□ -0.03
RAB40C-202ENST00000509637 PEX1O43933 1283 aa14.84□□□□□ -0.03
RAB40C-202ENST00000509637 TOXO94900 526 aa14.84□□□□□ -0.03
RAB40C-202ENST00000509637 CCDC175P0C221 793 aa14.84□□□□□ -0.03
RAB40C-202ENST00000509637 TFEBP19484 476 aa14.84□□□□□ -0.03
RAB40C-202ENST00000509637 HP1BP3Q5SSJ5 553 aaPredicted RBP14.84□□□□□ -0.03
RAB40C-202ENST00000509637 HECTD2Q5U5R9 776 aa14.84□□□□□ -0.03
RAB40C-202ENST00000509637 ADNP2Q6IQ32 1131 aa14.84□□□□□ -0.03
RAB40C-202ENST00000509637 SPNS3Q6ZMD2 512 aa14.84□□□□□ -0.03
RAB40C-202ENST00000509637 CDH24Q86UP0 819 aa14.84□□□□□ -0.03
RAB40C-202ENST00000509637 CCDC71Q8IV32 467 aaPredicted RBP14.84□□□□□ -0.03
RAB40C-202ENST00000509637 MYO1HQ8N1T3 1032 aa14.84□□□□□ -0.03
RAB40C-202ENST00000509637 SLC5A11Q8WWX8 675 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms