RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 BCL7AQ4VC05 210 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 KIAA1614Q5VZ46 1190 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 LIPJQ5W064 366 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 KIAA1211LQ6NV74 962 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 DOK6Q6PKX4 331 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 AGTRAPQ6RW13 159 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 TUBA1AQ71U36 451 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 CBLL1Q75N03 491 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 CYP4Z1Q86W10 505 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 LMNTD1Q8N9Z9 388 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 TTC29Q8NA56 475 aaPredicted RBP10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 OR4K3Q96R72 315 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 LGR4Q9BXB1 951 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 RSPH9Q9H1X1 276 aaPredicted RBP10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 EPHX3Q9H6B9 360 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 REEP1Q9H902 201 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 TRIM39Q9HCM9 518 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 STOX2Q9P2F5 926 aaPredicted RBP10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 DAPK2Q9UIK4 370 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 PCDHGA10Q9Y5H3 936 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 TICRRQ7Z2Z1 1910 aa10.59□□□□□ -0.71
SH3RF1-203ENST00000508685 A0A1W2PP55 124 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 CLIC1O00299 241 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 MYO1DO94832 1006 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 PCDH8O95206 1070 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 ZNF682O95780 498 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 CATP04040 527 aaKnown RBP10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 SEMG1P04279 462 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 MYCLP1P12525 358 aaPredicted RBP10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 HSD3B1P14060 373 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 AMD1P17707 334 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 SDC1P18827 310 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 EFNA1P20827 205 aaPredicted RBP10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 PTX3P26022 381 aaPredicted RBP10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 HSD3B2P26439 372 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 IMPA1P29218 277 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 KDELR2P33947 212 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 HALP42357 657 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 KIR2DL1P43626 348 aaPredicted RBP10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 DAPP51397 102 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 PSMD7P51665 324 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 CHIT1Q13231 466 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 NAE1Q13564 534 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 ENPP2Q13822 863 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 FAM46CQ5VWP2 391 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 FRG2Q64ET8 278 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 NOXRED1Q6NXP6 359 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 TUBA3EQ6PEY2 450 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 C11orf96Q7Z7L8 435 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 B3GNT8Q7Z7M8 397 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 ADCK1Q86TW2 530 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 THOC6Q86W42 341 aaKnown RBP10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 HEATR4Q86WZ0 1026 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 VPS37AQ8NEZ2 397 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 OR8J2Q8NGG1 315 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 OR6Q1Q8NGQ2 317 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 CLHC1Q8NHS4 586 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 RAB7BQ96AH8 199 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 ALPK1Q96QP1 1244 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 FRG2BQ96QU4 278 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 PKP4Q99569 1192 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 PITX2Q99697 317 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 PSD2Q9BQI7 771 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 NEURL2Q9BR09 285 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 MKRN2Q9H000 416 aaKnown RBP10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 SLC6A17Q9H1V8 727 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 RIBC2Q9H4K1 309 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 PAK1IP1Q9NWT1 392 aaPredicted RBP10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 ERVK-18Q9QC07 812 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 UTS2RQ9UKP6 389 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 DLGAP4Q9Y2H0 992 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 WDR37Q9Y2I8 494 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 DOCK9Q9BZ29 2069 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 CKAP5Q14008 2032 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 PRR23AA6NEV1 266 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 TMEM221A6NGB7 291 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 FPGTO14772 594 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 KCNK5O95279 499 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 JUPP14923 745 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 LTBRP36941 435 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 CLK3P49761 638 aaKnown RBP10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 MLLT10P55197 1068 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 CAMK2GQ13555 558 aaPredicted RBP10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 GTF2H3Q13889 308 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 CLCA4Q14CN2 919 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 MAD2L1BPQ15013 274 aaPredicted RBP10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 WSCD2Q2TBF2 565 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 MLIPQ5VWP3 458 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 ZCCHC8Q6NZY4 707 aaKnown RBP10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 FAM83HQ6ZRV2 1179 aaPredicted RBP10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 TRMT11Q7Z4G4 463 aaKnown RBP10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 HDDC3Q8N4P3 179 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 ZNF540Q8NDQ6 660 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 CNIH3Q8TBE1 160 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 SGCDQ92629 289 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 PANX1Q96RD7 426 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 EPYCQ99645 322 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 INPP5KQ9BT40 448 aa10.58□□□□□ -0.72
SH3RF1-203ENST00000508685 TM7SF3Q9NS93 570 aa10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms