RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 ZNF28P17035 718 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 CNTFP26441 200 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 MAGEA4P43358 317 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 UBE2NP61088 152 aaKnown RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 MAGOHP61326 146 aaKnown RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 PPP2R2BQ00005 443 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 MGAT5Q09328 741 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ST3GAL4Q11206 333 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ILKQ13418 452 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 FRG1Q14331 258 aaKnown RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF846Q147U1 533 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 KIR2DS5Q14953 304 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 CYTH1Q15438 398 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 PCID2Q5JVF3 399 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 DCST1Q5T197 706 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 LYPD8Q6UX82 237 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 DPPA4Q7L190 304 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 MARCH9Q86YJ5 346 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 HPS6Q86YV9 775 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 CADM2Q8N3J6 435 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 OR2AJ1Q8NGZ0 328 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 SLC22A8Q8TCC7 542 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 LINGO1Q96FE5 620 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TMEM68Q96MH6 324 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 VPS35Q96QK1 796 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 AARSD1Q9BTE6 412 aaKnown RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TMEM121BQ9BXQ6 578 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 PIGUQ9H490 435 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 NOL6Q9H6R4 1146 aaKnown RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 EFCAB1Q9HAE3 211 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 SRA1Q9HD15 236 aaKnown RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 MID1IP1Q9NPA3 183 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 USP36Q9P275 1121 aaKnown RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TMPRSS11EQ9UL52 423 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 RNF215Q9Y6U7 377 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 NBASA2RRP1 2371 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 LRRC10BA6NIK2 292 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 KLRC4-KLRK1H3BQV0 150 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 KCNJ13O60928 360 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 LRIG2O94898 1065 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 EDN1P05305 212 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 PGAM1P18669 254 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TFE3P19532 575 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ENPP1P22413 925 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 AK4P27144 223 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ADRA1BP35368 520 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 PGM1P36871 562 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 CACNA2D1P54289 1103 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 DIO3P55073 304 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TAS2R41P59536 307 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 RAB14P61106 215 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 KHDRBS1Q07666 443 aaKnown RBP eCLIP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 USF2Q15853 346 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 PTPN20Q4JDL3 420 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TBCELQ5QJ74 424 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 CCNYL2Q5T2Q4 361 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 PDPK2PQ6A1A2 396 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 GPR139Q6DWJ6 353 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 GTF2IRD2BQ6EKJ0 949 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TLDC1Q6P9B6 456 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 AAGABQ6PD74 315 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 KIAA0408Q6ZU52 694 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 PARS2Q7L3T8 475 aaKnown RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 GTF2IRD2Q86UP8 949 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF100Q8IYN0 542 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 ARFGAP1Q8N6T3 406 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 TMEM178AQ8NBL3 297 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 C19orf18Q8NEA5 215 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 IL22Q9GZX6 179 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 PRMT8Q9NR22 394 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 POLE4Q9NR33 117 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 FBXO6Q9NRD1 293 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 WSB2Q9NYS7 404 aaPredicted RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 RRP15Q9Y3B9 282 aaKnown RBP2.85□□□□□ -1.95
NEDD4-208ENST00000508342 MFHAS1Q9Y4C4 1052 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 PCDHA3Q9Y5H8 950 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 FADS3Q9Y5Q0 445 aa2.85□□□□□ -1.95
NEDD4-208ENST00000508342 GRID2IPA4D2P6 1211 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 FAM90A27PA6NNH2 459 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 YY2O15391 372 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 PROSCO94903 275 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 LINGO3P0C6S8 592 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 MTHFD1P11586 935 aaKnown RBP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 ZNF23P17027 643 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 HLA-FP30511 346 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 OPRD1P41143 372 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 DGKQP52824 942 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 ADAM17P78536 824 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 CCNIQ14094 377 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 HERC3Q15034 1050 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 TSNQ15631 228 aaKnown RBP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 NSDHLQ15738 373 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 CPSF6Q16630 551 aaKnown RBP eCLIP2.84□□□□□ -1.95
NEDD4-208ENST00000508342 SLC9B1Q4ZJI4 515 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 ALG10Q5BKT4 473 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 OLFML2AQ68BL7 652 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 ARL9Q6T311 187 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 LCTLQ6UWM7 567 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 CES3Q6UWW8 571 aa2.84□□□□□ -1.95
NEDD4-208ENST00000508342 CLNKQ7Z7G1 428 aa2.84□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms