RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 GAL3ST3Q96A11 431 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 QRFPRQ96P65 431 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 SORT1Q99523 831 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 MANSC1Q9H8J5 431 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 ZNF395Q9H8N7 513 aaPredicted RBP12.19□□□□□ -0.46
TCOF1-210ENST00000506767 BRF2Q9HAW0 419 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 ANKHQ9HCJ1 492 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 ZNF304Q9HCX3 659 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 PRDM7Q9NQW5 492 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 NDOR1Q9UHB4 597 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 HAO1Q9UJM8 370 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 CDC14AQ9UNH5 594 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.19□□□□□ -0.46
TCOF1-210ENST00000506767 SSUH2Q9Y2M2 353 aa12.19□□□□□ -0.46
TCOF1-210ENST00000506767 LOC101059948A0A1B0GTJ6 334 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 TMEM8BA6NDV4 472 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 TAF4O00268 1085 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 AZIN1O14977 448 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 ERI3O43414 337 aaKnown RBP12.18□□□□□ -0.46
TCOF1-210ENST00000506767 LYPLA1O75608 230 aaPredicted RBP12.18□□□□□ -0.46
TCOF1-210ENST00000506767 PIM1P11309 404 aaPredicted RBP12.18□□□□□ -0.46
TCOF1-210ENST00000506767 NEFHP12036 1026 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 HSD3B1P14060 373 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 IL1RNP18510 177 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 HSD3B2P26439 372 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 OR1D4P47884 311 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 AVPR1BP47901 424 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 HTR6P50406 440 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 RAB8AP61006 207 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 CSTF3Q12996 717 aaKnown RBP12.18□□□□□ -0.46
TCOF1-210ENST00000506767 ABRAXAS2Q15018 415 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 DEFB134Q4QY38 66 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 CLEC6AQ6EIG7 209 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 NIPAL1Q6NVV3 410 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 MRPL14Q6P1L8 145 aaKnown RBP12.18□□□□□ -0.46
TCOF1-210ENST00000506767 FAM198BQ6UWH4 519 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 COX15Q7KZN9 410 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 CLYBLQ8N0X4 340 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 AMER3Q8N944 861 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 SRFBP1Q8NEF9 429 aaKnown RBP12.18□□□□□ -0.46
TCOF1-210ENST00000506767 ZDHHC19Q8WVZ1 309 aaPredicted RBP12.18□□□□□ -0.46
TCOF1-210ENST00000506767 MR1Q95460 341 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 MMABQ96EY8 250 aaPredicted RBP12.18□□□□□ -0.46
TCOF1-210ENST00000506767 SERPINI1Q99574 410 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 DPH1Q9BZG8 443 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 FAM117AQ9C073 453 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 CHST8Q9H2A9 424 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 OR51B5Q9H339 312 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 CLK4Q9HAZ1 481 aaKnown RBP12.18□□□□□ -0.46
TCOF1-210ENST00000506767 ZDHHC2Q9UIJ5 367 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 RAP2CQ9Y3L5 183 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 NAALAD2Q9Y3Q0 740 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 TRAF6Q9Y4K3 522 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 DNAJC15Q9Y5T4 150 aa12.18□□□□□ -0.46
TCOF1-210ENST00000506767 FRYQ5TBA9 3013 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 IGLV3-12A0A075B6K2 115 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 SGK494L7N484 410 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 PLPP1O14494 284 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 KLHL18O94889 574 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 SEMA3DO95025 777 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 SCELO95171 688 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 HSPA4LO95757 839 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 B3GALT4O96024 378 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 ALBP02768 609 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 RAB40ALP0C0E4 278 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 TCN2P20062 427 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 SERPINB3P29508 390 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 EIF2S3P41091 472 aaKnown RBP12.17□□□□□ -0.46
TCOF1-210ENST00000506767 TSFMP43897 325 aaKnown RBP12.17□□□□□ -0.46
TCOF1-210ENST00000506767 PLA2G16P53816 162 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 DSG2Q14126 1118 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 SGO1Q5FBB7 561 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 SH2D4BQ5SQS7 431 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 ATG16L1Q676U5 607 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 TRIM40Q6P9F5 258 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 OVCH1Q7RTY7 1134 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 TRIM46Q7Z4K8 759 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 PROSER1Q86XN7 944 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 METTL27Q8N6F8 245 aaPredicted RBP12.17□□□□□ -0.46
TCOF1-210ENST00000506767 GBP7Q8N8V2 638 aaPredicted RBP12.17□□□□□ -0.46
TCOF1-210ENST00000506767 KDF1Q8NAX2 398 aaPredicted RBP12.17□□□□□ -0.46
TCOF1-210ENST00000506767 CT55Q8WUE5 264 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 KCNE4Q8WWG9 221 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 ZNF75CPQ92670 426 aaPredicted RBP12.17□□□□□ -0.46
TCOF1-210ENST00000506767 FKBP10Q96AY3 582 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 RGMAQ96B86 450 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 KCNC2Q96PR1 638 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 TBCDQ9BTW9 1192 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 ZNF717Q9BY31 904 aaPredicted RBP12.17□□□□□ -0.46
TCOF1-210ENST00000506767 SLC26A1Q9H2B4 701 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 TUBB1Q9H4B7 451 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 INTS9Q9NV88 658 aaKnown RBP12.17□□□□□ -0.46
TCOF1-210ENST00000506767 THAP1Q9NVV9 213 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 CROTQ9UKG9 612 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 MAU2Q9Y6X3 613 aa12.17□□□□□ -0.46
TCOF1-210ENST00000506767 SCN3AQ9NY46 2000 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 KMT2BQ9UMN6 2715 aaPredicted RBP12.16□□□□□ -0.46
TCOF1-210ENST00000506767 VSTM2BA6NLU5 285 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 TMEM233B4DJY2 109 aa12.16□□□□□ -0.46
TCOF1-210ENST00000506767 C21orf140B9A014 251 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms