RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 SVILO95425 2214 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 COL12A1Q99715 3063 aa8.54□□□□□ -1.04
PDLIM5-209ENST00000506632 UNC79Q9P2D8 2635 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 IGKV3D-11A0A0A0MRZ8 115 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 TRAV17A0A0B4J275 112 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 ESYT3A0FGR9 886 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 ANKUB1A6NFN9 424 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 WIPF3A6NGB9 483 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 URADA6NGE7 173 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 NCF1BA6NI72 391 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 NCF1CA8MVU1 366 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 CDC123O75794 336 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 AGFG2O95081 481 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 WDPCPO95876 746 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 SERPIND1P05546 499 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 SLC35E2BP0CK96 405 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 GP1BBP13224 206 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 NCF1P14598 390 aaPredicted RBP8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 EPORP19235 508 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 JAK1P23458 1154 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 GSTM2P28161 218 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 STX2P32856 288 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 GMPRP36959 345 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 KCNC1P48547 511 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 RAB8AP61006 207 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 OLR1P78380 273 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 ARG2P78540 354 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 CKAP4Q07065 602 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 PCDH1Q08174 1060 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 DLG1Q12959 904 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 SLBPQ14493 270 aaKnown RBP eCLIP8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 EFTUD2Q15029 972 aaKnown RBP eCLIP8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 RBBP5Q15291 538 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 NSDHLQ15738 373 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 INAQ16352 499 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 EXT1Q16394 746 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 BTBD16Q32M84 506 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 ADPRMQ3LIE5 342 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 SFT2D3Q587I9 215 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 SULT1C3Q6IMI6 304 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 PAPD4Q6PIY7 484 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 TMIGD1Q6UXZ0 262 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 QSOX2Q6ZRP7 698 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 VN1R5Q7Z5H4 357 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 ISCA2Q86U28 154 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 PACS2Q86VP3 889 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 CCDC25Q86WR0 208 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 GPSM1Q86YR5 675 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 PPM1NQ8N819 430 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 TTLQ8NG68 377 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 OR1N1Q8NGS0 311 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 M1APQ8TC57 530 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 FBF1Q8TES7 1133 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 GAL3ST3Q96A11 431 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 SEC16BQ96JE7 1060 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 NPAS2Q99743 824 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 LRRC1Q9BTT6 524 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 CAPS2Q9BXY5 557 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 CNOT10Q9H9A5 744 aaKnown RBP8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 MMP25Q9NPA2 562 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 DNAJC11Q9NVH1 559 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 WWOXQ9NZC7 414 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 ASB1Q9Y576 335 aa8.53□□□□□ -1.04
PDLIM5-209ENST00000506632 TCRBV16S1A1N1A0A5B0 115 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 HMX2A2RU54 273 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 LRIT2A6NDA9 550 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 OR5H15A6NDH6 313 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 CLEC3AO75596 197 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 STK16O75716 305 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 DDAH2O95865 285 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 RNH1P13489 461 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 EDN3P14138 238 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 CD22P20273 847 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 HNRNPH1P31943 449 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 CASP2P42575 452 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 HSPA7P48741 367 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 TDGF1P3P51864 188 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 SLC26A5P58743 744 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 STXBP1P61764 594 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 BTG2P78543 158 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 SLC7A5Q01650 507 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 WHAMMP3Q1A5X7 153 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 FBXO48Q5FWF7 155 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 TOR1AIP1Q5JTV8 583 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 ABHD17BQ5VST6 288 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 C8orf74Q6P047 294 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 CMC1Q7Z7K0 106 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 ZGRF1Q86YA3 2104 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 RELL1Q8IUW5 271 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 CENPLQ8N0S6 344 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 KRT78Q8N1N4 520 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 CA13Q8N1Q1 262 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 MMGT1Q8N4V1 131 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 ELP5Q8TE02 316 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 UBTD2Q8WUN7 234 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 ESAMQ96AP7 390 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 MS4A6EQ96DS6 147 aa8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 PTCD3Q96EY7 689 aaKnown RBP8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 C16orf45Q96MC5 204 aaPredicted RBP8.52□□□□□ -1.05
PDLIM5-209ENST00000506632 QRFPRQ96P65 431 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms