RNA–Protein interactions for RNA: ENST00000505657.1

CHD1-203, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 736 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-203ENST00000505657 THUMPD3Q9BV44 507 aaKnown RBP3.13□□□□□ -1.91
CHD1-203ENST00000505657 PAPOLGQ9BWT3 736 aaKnown RBP3.13□□□□□ -1.91
CHD1-203ENST00000505657 TRIM6Q9C030 488 aaPredicted RBP3.13□□□□□ -1.91
CHD1-203ENST00000505657 RPF1Q9H9Y2 349 aaKnown RBP3.13□□□□□ -1.91
CHD1-203ENST00000505657 GMEB2Q9UKD1 530 aa3.13□□□□□ -1.91
CHD1-203ENST00000505657 MRPS18CQ9Y3D5 142 aaKnown RBP3.13□□□□□ -1.91
CHD1-203ENST00000505657 PCDHGA1Q9Y5H4 931 aa3.13□□□□□ -1.91
CHD1-203ENST00000505657 SMAD5-AS1Q9Y6J3 95 aa3.13□□□□□ -1.91
CHD1-203ENST00000505657 COL2A1P02458 1487 aaPredicted RBP3.13□□□□□ -1.91
CHD1-203ENST00000505657 IGLV4-3A0A075B6K6 122 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 A0A0B4J203 849 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 SHISA9B4DS77 424 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 ZNF732B4DXR9 585 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 ANHXE9PGG2 379 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 RNF103O00237 685 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 CTDSPLO15194 276 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 ZNF749O43361 778 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 TBCAO75347 108 aaKnown RBP3.12□□□□□ -1.91
CHD1-203ENST00000505657 NME6O75414 186 aaPredicted RBP3.12□□□□□ -1.91
CHD1-203ENST00000505657 POP4O95707 220 aaKnown RBP3.12□□□□□ -1.91
CHD1-203ENST00000505657 HPRP00739 348 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 RLN1P04808 185 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 SCG2P13521 617 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 GLULP15104 373 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 GIFP27352 417 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 FEN1P39748 380 aaKnown RBP3.12□□□□□ -1.91
CHD1-203ENST00000505657 ATP4BP51164 291 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 EVCP57679 992 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 FKBP3Q00688 224 aaKnown RBP3.12□□□□□ -1.91
CHD1-203ENST00000505657 KIAA0141Q14154 515 aaPredicted RBP3.12□□□□□ -1.91
CHD1-203ENST00000505657 GRB14Q14449 540 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 MS4A18Q3C1V0 323 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 SPINK14Q6IE38 97 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 PODNL1Q6PEZ8 512 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 PET117Q6UWS5 81 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 Q6ZVQ6 151 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 GALNTL5Q7Z4T8 443 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 SIX6OS1Q8N1H7 587 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 AMER3Q8N944 861 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 SMYD1Q8NB12 490 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 OR5M9Q8NGP3 310 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 DEPDC1BQ8WUY9 529 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 RASL10AQ92737 203 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 ERO1AQ96HE7 468 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 PCDHB18PQ96TA0 734 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 PRMT1Q99873 361 aaKnown RBP3.12□□□□□ -1.91
CHD1-203ENST00000505657 CCDC28BQ9BUN5 200 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 RAB11FIP5Q9BXF6 653 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 PANK3Q9H999 370 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 C3orf14Q9HBI5 128 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 MRGBPQ9NV56 204 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 KLK11Q9UBX7 282 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 FER1L5A0AVI2 2057 aa3.12□□□□□ -1.91
CHD1-203ENST00000505657 ANKDD1BA6NHY2 528 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 NKX6-3A6NJ46 265 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 ACOD1A6NK06 481 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 YDJCA8MPS7 323 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 H0YIG0 161 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 CTNNA2P26232 953 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 PIK3R1P27986 724 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 CAPGP40121 348 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 OR3A3P47888 321 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 NDUFV3P56181 108 aaKnown RBP3.11□□□□□ -1.91
CHD1-203ENST00000505657 SLC8A3P57103 927 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 ABCE1P61221 599 aaKnown RBP3.11□□□□□ -1.91
CHD1-203ENST00000505657 RBP5P82980 135 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 PTK6Q13882 451 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 MAPK11Q15759 364 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 MLF2Q15773 248 aaPredicted RBP3.11□□□□□ -1.91
CHD1-203ENST00000505657 UPP1Q16831 310 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.11□□□□□ -1.91
CHD1-203ENST00000505657 PM20D1Q6GTS8 502 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 NHLRC1Q6VVB1 395 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 C17orf107Q6ZR85 190 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 C15orf52Q6ZUT6 534 aaKnown RBP3.11□□□□□ -1.91
CHD1-203ENST00000505657 TIPARPQ7Z3E1 657 aaKnown RBP3.11□□□□□ -1.91
CHD1-203ENST00000505657 KCNMB4Q86W47 210 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 CCDC185Q8N715 623 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 POM121L12Q8N7R1 296 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 NHLRC2Q8NBF2 726 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 NPRL2Q8WTW4 380 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 SMPDL3AQ92484 453 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 C11orf52Q96A22 123 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 FAM162AQ96A26 154 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 FOXN4Q96NZ1 517 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 CITED2Q99967 270 aaPredicted RBP3.11□□□□□ -1.91
CHD1-203ENST00000505657 SLC39A8Q9C0K1 460 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 LSG1Q9H089 658 aaKnown RBP3.11□□□□□ -1.91
CHD1-203ENST00000505657 TUBB1Q9H4B7 451 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 GPN1Q9HCN4 374 aaPredicted RBP3.11□□□□□ -1.91
CHD1-203ENST00000505657 DBF4Q9UBU7 674 aaPredicted RBP3.11□□□□□ -1.91
CHD1-203ENST00000505657 ITGA11Q9UKX5 1188 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 STYXL1Q9Y6J8 313 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 ZHX2Q9Y6X8 837 aa3.11□□□□□ -1.91
CHD1-203ENST00000505657 ILVBLA1L0T0 632 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 SRRM4A7MD48 611 aaKnown RBP3.1□□□□□ -1.91
CHD1-203ENST00000505657 ARHGEF33A8MVX0 844 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 SLC30A4O14863 429 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 TNFSF12O43508 249 aa3.1□□□□□ -1.91
CHD1-203ENST00000505657 CALCAP01258 141 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms