RNA–Protein interactions for RNA: ENST00000503628.5

DDR1-250, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-250ENST00000503628 FOXO6A8MYZ6 492 aa14.86□□□□□ -0.03
DDR1-250ENST00000503628 EIF3FO00303 357 aaPredicted RBP14.86□□□□□ -0.03
DDR1-250ENST00000503628 MATN4O95460 622 aa14.86□□□□□ -0.03
DDR1-250ENST00000503628 ACSL3O95573 720 aa14.86□□□□□ -0.03
DDR1-250ENST00000503628 SP1P08047 785 aa14.86□□□□□ -0.03
DDR1-250ENST00000503628 ENO3P13929 434 aaPredicted RBP14.86□□□□□ -0.03
DDR1-250ENST00000503628 GP5P40197 560 aa14.86□□□□□ -0.03
DDR1-250ENST00000503628 RNFT1Q5M7Z0 435 aa14.86□□□□□ -0.03
DDR1-250ENST00000503628 UBAP2Q5T6F2 1119 aaKnown RBP14.86□□□□□ -0.03
DDR1-250ENST00000503628 GARNL3Q5VVW2 1013 aa14.86□□□□□ -0.03
DDR1-250ENST00000503628 CPNE9Q8IYJ1 553 aa14.86□□□□□ -0.03
DDR1-250ENST00000503628 SHISA5Q8N114 240 aa14.86□□□□□ -0.03
DDR1-250ENST00000503628 EID3Q8N140 333 aa14.86□□□□□ -0.03
DDR1-250ENST00000503628 PPM1NQ8N819 430 aa14.86□□□□□ -0.03
DDR1-250ENST00000503628 VPS39Q96JC1 886 aa14.86□□□□□ -0.03
DDR1-250ENST00000503628 RBBP8Q99708 897 aa14.86□□□□□ -0.03
DDR1-250ENST00000503628 OLFM1Q99784 485 aa14.86□□□□□ -0.03
DDR1-250ENST00000503628 ZNF559Q9BR84 538 aa14.86□□□□□ -0.03
DDR1-250ENST00000503628 PLCD4Q9BRC7 762 aa14.86□□□□□ -0.03
DDR1-250ENST00000503628 FUT8Q9BYC5 575 aa14.86□□□□□ -0.03
DDR1-250ENST00000503628 DRC3Q9H069 523 aa14.86□□□□□ -0.03
DDR1-250ENST00000503628 ANKZF1Q9H8Y5 726 aa14.86□□□□□ -0.03
DDR1-250ENST00000503628 DNHD1Q96M86 4753 aa14.86□□□□□ -0.03
DDR1-250ENST00000503628 FBN3Q75N90 2809 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 ABCA4P78363 2273 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 NKX2-6A6NCS4 301 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 OR2W5A6NFC9 320 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 FAM155BO75949 473 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 FAM153BP0C7A2 387 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 MPC1LP0DKB6 136 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 KLK2P20151 261 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 SNRPNP63162 240 aaKnown RBP14.85□□□□□ -0.03
DDR1-250ENST00000503628 OC90Q02509 493 aaPredicted RBP14.85□□□□□ -0.03
DDR1-250ENST00000503628 PDAP1Q13442 181 aaKnown RBP14.85□□□□□ -0.03
DDR1-250ENST00000503628 NAA25Q14CX7 972 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 EFTUD2Q15029 972 aaKnown RBP eCLIP14.85□□□□□ -0.03
DDR1-250ENST00000503628 MAPKAPK3Q16644 382 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 FAM153CQ494X1 144 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 GRTP1Q5TC63 336 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 MFSD4BQ5TF39 518 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 SLC25A25Q6KCM7 469 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 PAQR3Q6TCH7 311 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 PAQR7Q86WK9 346 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 SPNS2Q8IVW8 549 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 DMRTC2Q8IXT2 367 aaPredicted RBP14.85□□□□□ -0.03
DDR1-250ENST00000503628 GSPT2Q8IYD1 628 aaKnown RBP14.85□□□□□ -0.03
DDR1-250ENST00000503628 MARVELD2Q8N4S9 558 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 FAM98AQ8NCA5 519 aaKnown RBP14.85□□□□□ -0.03
DDR1-250ENST00000503628 OR2A5Q96R48 311 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 UCK2Q9BZX2 261 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 CXXC4Q9H2H0 198 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 GSX1Q9H4S2 264 aaPredicted RBP14.85□□□□□ -0.03
DDR1-250ENST00000503628 ACSS3Q9H6R3 686 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 MRPS30Q9NP92 439 aaKnown RBP14.85□□□□□ -0.03
DDR1-250ENST00000503628 HRH3Q9Y5N1 445 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 SCN3AQ9NY46 2000 aa14.85□□□□□ -0.03
DDR1-250ENST00000503628 AKAP6Q13023 2319 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 IGKV1-8A0A0C4DH67 115 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 GABRR3A8MPY1 467 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 PSIP1O75475 530 aaKnown RBP14.84□□□□□ -0.03
DDR1-250ENST00000503628 NEURL1O76050 574 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 SAT1P21673 171 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 PTGER1P34995 402 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 SPRP35270 261 aaPredicted RBP14.84□□□□□ -0.03
DDR1-250ENST00000503628 CCNFP41002 786 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 RGS4P49798 205 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 POU4F1Q01851 419 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 TFF3Q07654 80 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 FAM53BQ14153 422 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 MINDY4Q4G0A6 757 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 CES4AQ5XG92 561 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 LRRC8EQ6NSJ5 796 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 SUSD1Q6UWL2 747 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 CYHR1Q6ZMK1 362 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 TRMT10CQ7L0Y3 403 aaKnown RBP14.84□□□□□ -0.03
DDR1-250ENST00000503628 ANKRD37Q7Z713 158 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 HORMAD2Q8N7B1 307 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 CHDHQ8NE62 594 aaPredicted RBP14.84□□□□□ -0.03
DDR1-250ENST00000503628 LILRB4Q8NHJ6 448 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 M1APQ8TC57 530 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 MAGEC3Q8TD91 643 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 EEF1AKMT1Q8WVE0 214 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.84□□□□□ -0.03
DDR1-250ENST00000503628 RERGQ96A58 199 aaPredicted RBP14.84□□□□□ -0.03
DDR1-250ENST00000503628 GPR22Q99680 433 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 FOXC2Q99958 501 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 TXLNGYQ9BZA5 131 aa14.84□□□□□ -0.03
DDR1-250ENST00000503628 CCM2LQ9NUG4 571 aaPredicted RBP14.84□□□□□ -0.03
DDR1-250ENST00000503628 C19orf25Q9UFG5 118 aaPredicted RBP14.84□□□□□ -0.03
DDR1-250ENST00000503628 MTO1Q9Y2Z2 717 aaKnown RBP14.84□□□□□ -0.03
DDR1-250ENST00000503628 FAM90A27PA6NNH2 459 aa14.83□□□□□ -0.04
DDR1-250ENST00000503628 P2RX6O15547 441 aa14.83□□□□□ -0.04
DDR1-250ENST00000503628 TOXO94900 526 aa14.83□□□□□ -0.04
DDR1-250ENST00000503628 DRD2P14416 443 aa14.83□□□□□ -0.04
DDR1-250ENST00000503628 ZNF24P17028 368 aa14.83□□□□□ -0.04
DDR1-250ENST00000503628 PGGT1BP53609 377 aa14.83□□□□□ -0.04
DDR1-250ENST00000503628 TAS2R39P59534 338 aa14.83□□□□□ -0.04
DDR1-250ENST00000503628 IL2P60568 153 aa14.83□□□□□ -0.04
DDR1-250ENST00000503628 PPP2R2AP63151 447 aa14.83□□□□□ -0.04
DDR1-250ENST00000503628 EXT1Q16394 746 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms