RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 TEX28O15482 410 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 KHDRBS3O75525 346 aaKnown RBP2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 SEC24AO95486 1093 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 APBB3O95704 486 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 OPN1MWP04001 364 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 ALPPP05187 535 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 HMOX1P09601 288 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 OPN1MW2P0DN77 364 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 OPN1MW3P0DN78 364 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 DLATP10515 647 aaKnown RBP2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 PRKAR1AP10644 381 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 ALPPL2P10696 532 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 UROSP10746 265 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 FERP16591 822 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 CEBPBP17676 345 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 RPL35AP18077 110 aaKnown RBP2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 ITIH1P19827 911 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 CCNA2P20248 432 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 ELAVL4P26378 380 aaKnown RBP2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 PIK3R1P27986 724 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 ADSSP30520 456 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 NPBWR1P48145 328 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 LEPRP48357 1165 aaKnown RBP2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 CASP9P55211 416 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 KIAA1024LP59773 190 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 SGCGQ13326 291 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 TRADDQ15628 312 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 INAQ16352 499 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 ZNF74Q16587 644 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 TMEM30BQ3MIR4 351 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 IQCCQ4KMZ1 466 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 SLC39A12Q504Y0 691 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 ZNF542PQ5EBM4 170 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 ZNF789Q5FWF6 425 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 TEX35Q5T0J7 233 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 OR4C11Q6IEV9 310 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 PWWP2BQ6NUJ5 590 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 PODNL1Q6PEZ8 512 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 BHLHB9Q6PI77 547 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 Q6ZSR9 355 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 SLC24A5Q71RS6 500 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 CPEB2Q7Z5Q1 589 aaKnown RBP2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 TMEM110Q86TL2 294 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 PRUNE1Q86TP1 453 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 ANKRD46Q86W74 232 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 HOGA1Q86XE5 327 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 MEX3DQ86XN8 651 aaKnown RBP2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 CCDC60Q8IWA6 550 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 CNTN4Q8IWV2 1026 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 LSMEM2Q8N112 164 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 GPC2Q8N158 579 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 PRSS35Q8N3Z0 413 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 DCLK2Q8N568 766 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 FAM89BQ8N5H3 189 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 KIAA0895Q8NCT3 520 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 OR5AP2Q8NGF4 316 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 OR10G8Q8NGN5 311 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 MRGPRDQ8TDS7 321 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 UBLCP1Q8WVY7 318 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 AZIN2Q96A70 460 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 ANKRD9Q96BM1 317 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 GMPPAQ96IJ6 420 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 RBM41Q96IZ5 413 aaKnown RBP2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 FAM111AQ96PZ2 611 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 KCNK16Q96T55 309 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 LITAFQ99732 161 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 ALKBH7Q9BT30 221 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 CACNG6Q9BXT2 260 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 TEX13BQ9BXU2 312 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 TRIM7Q9C029 511 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 NYXQ9GZU5 481 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 WDR13Q9H1Z4 485 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 HSD3B7Q9H2F3 369 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 EGLN3Q9H6Z9 239 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 C10orf88Q9H8K7 445 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 SRD5A3Q9H8P0 318 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 PRMT8Q9NR22 394 aaPredicted RBP2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 SLC7A10Q9NS82 523 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 MAN2C1Q9NTJ4 1040 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 C2orf42Q9NWW7 574 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 COMMD8Q9NX08 183 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 RNF186Q9NXI6 227 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 NINJ2Q9NZG7 142 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 IL36AQ9UHA7 158 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 SLC12A6Q9UHW9 1150 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 CTNNA3Q9UI47 895 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 NOCTQ9UK39 431 aaKnown RBP2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 PRDM4Q9UKN5 801 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 WDR37Q9Y2I8 494 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 NSG2Q9Y328 171 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 PYGO1Q9Y3Y4 419 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 HBS1LQ9Y450 684 aaKnown RBP2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 ANGPTL3Q9Y5C1 460 aa2.13□□□□□ -2.07
HMGB1P35-201ENST00000503360 A0A087WUV0 522 aaPredicted RBP2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 A0A0B4J203 849 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 CLRN2A0PK11 232 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 ILVBLA1L0T0 632 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 MEIOCA2RUB1 952 aa2.12□□□□□ -2.07
HMGB1P35-201ENST00000503360 MTMR11A4FU01 709 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms