RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 MFSD4BQ5TF39 518 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 ANKRD22Q5VYY1 191 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 ARHGAP11AQ6P4F7 1023 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 CCDC137Q6PK04 289 aaKnown RBP5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 PAOXQ6QHF9 649 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 PAQR3Q6TCH7 311 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 ACAD11Q709F0 780 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 CEP97Q8IW35 865 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 SCUBE1Q8IWY4 988 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 PPIL6Q8IXY8 311 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 AGGF1Q8N302 714 aaeCLIP5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 ARMC2Q8NEN0 867 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 OR8K3Q8NH51 312 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 LILRB4Q8NHJ6 448 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 ACTRT1Q8TDG2 376 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 UTP15Q8TED0 518 aaKnown RBP5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 GRK7Q8WTQ7 553 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 CA5BP1Q8WTZ4 195 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 CHTF18Q8WVB6 975 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 SLC5A11Q8WWX8 675 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 FAM136AQ96C01 138 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 LRRC39Q96DD0 335 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 PEX11GQ96HA9 241 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 PTCHD1Q96NR3 888 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 OR4K3Q96R72 315 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 CAPS2Q9BXY5 557 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 CDCP1Q9H5V8 836 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 NT5DC2Q9H857 520 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 KCNN3Q9UGI6 736 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 NPIPA1Q9UND3 350 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 YARS2Q9Y2Z4 477 aaKnown RBP5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 JRKLQ9Y4A0 524 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 CLDN16Q9Y5I7 305 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 ARHGAP21Q5T5U3 1957 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 C2CD3Q4AC94 2353 aa5.71□□□□□ -1.5
LSM3P4-201ENST00000502948 AKAP9Q99996 3911 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 A0A088AWK7 358 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 A0A1B0GVC2 190 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 PABPN1LA6NDY0 278 aaKnown RBP5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 OR1F1O43749 312 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 WISP2O76076 250 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 IGHG3P01860 377 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 AHSGP02765 367 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 HOXD4P09016 255 aaPredicted RBP5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 CDH1P12830 882 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 CD1EP15812 388 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 GNAZP19086 355 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 ZNF10P21506 573 aaPredicted RBP5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 MSX1P28360 303 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 CHRNB4P30926 498 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 PTGS2P35354 604 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 ITGA8P53708 1063 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 STXBP1P61764 594 aaKnown RBP5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 REEP5Q00765 189 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 TLE4Q04727 773 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 TBL3Q12788 808 aaKnown RBP5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 BIKQ13323 160 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 PDAP1Q13442 181 aaKnown RBP5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 E2F2Q14209 437 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 RCN2Q14257 317 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 CSHL1Q14406 222 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 CRYMQ14894 314 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 CDSNQ15517 529 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 MAPKAPK3Q16644 382 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 PPP1R3AQ16821 1122 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 ADPRMQ3LIE5 342 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 DEFB134Q4QY38 66 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 CMPK2Q5EBM0 449 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 RNFT1Q5M7Z0 435 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 CDKL4Q5MAI5 379 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 RNASEH2BQ5TBB1 312 aaKnown RBP5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 NDUFAF5Q5TEU4 345 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 ZNF468Q5VIY5 522 aaPredicted RBP5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 FCRLBQ6BAA4 426 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 FAM45BPQ6NSW5 357 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 TTC27Q6P3X3 843 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 SBSNQ6UWP8 590 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 FGD2Q7Z6J4 655 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 CDH24Q86UP0 819 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 SULF2Q8IWU5 870 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 DMRTC2Q8IXT2 367 aaPredicted RBP5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 ZNF595Q8IYB9 648 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 CPSF7Q8N684 471 aaKnown RBP5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 GOLM1Q8NBJ4 401 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 MYRIPQ8NFW9 859 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 OR5T3Q8NGG3 340 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 FAM45AQ8TCE6 357 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 CREB3L4Q8TEY5 395 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 NINJ1Q92982 152 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 TSLPQ969D9 159 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 NEIL2Q969S2 332 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 GAL3ST3Q96A11 431 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 MAGOHBQ96A72 148 aaKnown RBP5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 CERS2Q96G23 380 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 VMP1Q96GC9 406 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 MACROD1Q9BQ69 325 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 AIF1LQ9BQI0 150 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 HES7Q9BYE0 225 aa5.7□□□□□ -1.5
LSM3P4-201ENST00000502948 DEFB126Q9BYW3 111 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms