RNA–Protein interactions for RNA: ENST00000498525.5

CDK5RAP1-216, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 5

Gene CDK5RAP1, Length 777 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-216ENST00000498525 THAP3Q8WTV1 239 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP1-216ENST00000498525 ATL1Q8WXF7 558 aa11.4□□□□□ -0.58
CDK5RAP1-216ENST00000498525 RELTQ969Z4 430 aa11.4□□□□□ -0.58
CDK5RAP1-216ENST00000498525 CCDC120Q96HB5 630 aa11.4□□□□□ -0.58
CDK5RAP1-216ENST00000498525 SMIM10Q96HG1 83 aa11.4□□□□□ -0.58
CDK5RAP1-216ENST00000498525 OR1F2PQ96R84 312 aa11.4□□□□□ -0.58
CDK5RAP1-216ENST00000498525 NAPGQ99747 312 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP1-216ENST00000498525 UTP23Q9BRU9 249 aaKnown RBP11.4□□□□□ -0.58
CDK5RAP1-216ENST00000498525 SLC6A16Q9GZN6 736 aa11.4□□□□□ -0.58
CDK5RAP1-216ENST00000498525 MMP25Q9NPA2 562 aa11.4□□□□□ -0.58
CDK5RAP1-216ENST00000498525 MOCS1Q9NZB8 636 aa11.4□□□□□ -0.58
CDK5RAP1-216ENST00000498525 ABI3Q9P2A4 366 aa11.4□□□□□ -0.58
CDK5RAP1-216ENST00000498525 COPG2Q9UBF2 871 aa11.4□□□□□ -0.58
CDK5RAP1-216ENST00000498525 CTNNAL1Q9UBT7 734 aa11.4□□□□□ -0.58
CDK5RAP1-216ENST00000498525 TINAGQ9UJW2 476 aa11.4□□□□□ -0.58
CDK5RAP1-216ENST00000498525 CORO1CQ9ULV4 474 aaPredicted RBP11.4□□□□□ -0.58
CDK5RAP1-216ENST00000498525 SAR1BQ9Y6B6 198 aa11.4□□□□□ -0.58
CDK5RAP1-216ENST00000498525 DCHS2Q6V1P9 2916 aa11.4□□□□□ -0.58
CDK5RAP1-216ENST00000498525 NPIPA5E9PKD4 350 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 TGFBR3LH3BV60 316 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 TAPBPO15533 448 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 PHGDHO43175 533 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 PRMT3O60678 531 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 PRAMEF4O60810 478 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 NEURL1O76050 574 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 CRYABP02511 175 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 SNRPB2P08579 225 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 ENO2P09104 434 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 TPP2P29144 1249 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 HNRNPH1P31943 449 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 AHRP35869 848 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 AP2B1P63010 937 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 BTN3A2P78410 334 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 RUNX2Q13950 521 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 CDSNQ15517 529 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 INAQ16352 499 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 C3AR1Q16581 482 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 MAPKAPK3Q16644 382 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 RNFT1Q5M7Z0 435 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 PRAMEF9Q5VWM5 478 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 SYDE1Q6ZW31 735 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 ABHD13Q7L211 337 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 RPS19BP1Q86WX3 136 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 ZNF227Q86WZ6 799 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 NKAPQ8N5F7 415 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 DNAJB8Q8NHS0 232 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 ELP5Q8TE02 316 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 ITLN2Q8WWU7 325 aaPredicted RBP11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 CCT6BQ92526 530 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 MARVELD3Q96A59 401 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 RHBDF1Q96CC6 855 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 LRRC39Q96DD0 335 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 VPS39Q96JC1 886 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 AIF1LQ9BQI0 150 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 MCMBPQ9BTE3 642 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 LIN28AQ9H9Z2 209 aaKnown RBP11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 PELI2Q9HAT8 420 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 GPAMQ9HCL2 828 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 NPIPA1Q9UND3 350 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 OARD1Q9Y530 152 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 PKDREJQ9NTG1 2253 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 PDZD2O15018 2839 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 FBN2P35556 2912 aa11.39□□□□□ -0.59
CDK5RAP1-216ENST00000498525 ZNF407Q9C0G0 2248 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 E7ESA3 106 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 SH3BGRLO75368 114 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 FAM155BO75949 473 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 TBX6O95947 436 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 SP1P08047 785 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 C1GALT1C1LP0DN25 315 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 RNH1P13489 461 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 EEF1DP29692 281 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 RFC3P40938 356 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 SLC6A12P48065 614 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 NR0B1P51843 470 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 ADORA2A-AS1P86434 159 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 ALDH6A1Q02252 535 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 C2orf54Q08AI8 447 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 SLBPQ14493 270 aaKnown RBP eCLIP11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 TRADDQ15628 312 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 C16orf47Q6ZP98 133 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 SLCO4C1Q6ZQN7 724 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 FRA10AC1Q70Z53 315 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 VN1R5Q7Z5H4 357 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 MRGPRGQ86SM5 289 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 C17orf53Q8N3J3 647 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 TBC1D19Q8N5T2 526 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 CPSF7Q8N684 471 aaKnown RBP11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 NFAM1Q8NET5 270 aaPredicted RBP11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 TRPV3Q8NET8 790 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 EXT2Q93063 718 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 SCMH1Q96GD3 660 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 TMEM79Q9BSE2 394 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 FAM129AQ9BZQ8 928 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 SAYSD1Q9NPB0 183 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 LRFN1Q9P244 771 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 KCNE2Q9Y6J6 123 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 NCKAP5O14513 1909 aa11.38□□□□□ -0.59
CDK5RAP1-216ENST00000498525 IGKV3D-11A0A0A0MRZ8 115 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms