RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 SNTB2Q13425 540 aaKnown RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 PPIGQ13427 754 aaKnown RBP eCLIP2.98□□□□□ -1.937e-6■■□□□ 12.3
SNRNP48-202ENST00000496946 NAE1Q13564 534 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ATP1A4Q13733 1029 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 SELPLGQ14242 412 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 GRB7Q14451 532 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 MVPQ14764 893 aaKnown RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 NOMO1Q15155 1222 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF174Q15697 407 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 CCDC6Q16204 474 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 FSCN1Q16658 493 aaKnown RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 SYT16Q17RD7 645 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 C3orf36Q3SXR2 165 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 SLC36A3Q495N2 470 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 CERKLQ49MI3 558 aaPredicted RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 COQ5Q5HYK3 327 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 C9orf152Q5JTZ5 239 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 CCNYL2Q5T2Q4 361 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF470Q6ECI4 717 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 TMEM108Q6UXF1 575 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 KIAA1324Q6UXG2 1013 aaKnown RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 RBM44Q6ZP01 1051 aaKnown RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 LRRC70Q7Z2Q7 622 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 VTCN1Q7Z7D3 282 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 LUZP2Q86TE4 346 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 KLBQ86Z14 1044 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 KLHL7Q8IXQ5 586 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 STK40Q8N2I9 435 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 TMEM104Q8NE00 496 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 MCUQ8NE86 351 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 STEAP2Q8NFT2 490 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 FAM172AQ8WUF8 416 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 CORO2AQ92828 525 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ATOH1Q92858 354 aaPredicted RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 SLAMF9Q96A28 289 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 MRGPRFQ96AM1 343 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 KLHL29Q96CT2 875 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 TXNDC15Q96J42 360 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 PACRGQ96M98 296 aaPredicted RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 RNF145Q96MT1 663 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 MBOAT7Q96N66 472 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 FOXN4Q96NZ1 517 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ADOQ96SZ5 270 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 GPHA2Q96T91 129 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 TCEAL7Q9BRU2 100 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 RTKNQ9BST9 563 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 NAA11Q9BSU3 229 aaPredicted RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 COLEC11Q9BWP8 271 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 POLDIP3Q9BY77 421 aaKnown RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 OSBPL8Q9BZF1 889 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 UPF3AQ9H1J1 476 aaKnown RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 RGCCQ9H4X1 137 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ASB7Q9H672 318 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 DCLRE1BQ9H816 532 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 DDX31Q9H8H2 851 aaKnown RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 BIN3Q9NQY0 253 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 OLFML3Q9NRN5 406 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 FAM212BQ9NTI7 297 aaPredicted RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 TEX10Q9NXF1 929 aaPredicted RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 GLTPQ9NZD2 209 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 PDP1Q9P0J1 537 aaPredicted RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 MYEF2Q9P2K5 600 aaKnown RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 WNT16Q9UBV4 365 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF70Q9UC06 446 aaPredicted RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 Q9UFV3 132 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 MKLN1Q9UL63 735 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 OAZ3Q9UMX2 235 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 GUCA1BQ9UMX6 200 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 SCML1Q9UN30 329 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 TP53TG5Q9Y2B4 290 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 PTRH2Q9Y3E5 179 aaKnown RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 INSL6Q9Y581 213 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ALG5Q9Y673 324 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 DAPK1P53355 1430 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ZNF518AQ6AHZ1 1483 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 A0A1W2PRB8 838 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 PRSS38A1L453 326 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 PIPSLA2A3N6 862 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 TRIM49BA6NDI0 452 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ARHGAP42A6NI28 874 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 CYR61O00622 381 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 HNRNPDLO14979 420 aaKnown RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 PHGDHO43175 533 aaKnown RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 B4GALT2O60909 372 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 SLC43A1O75387 559 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 ERN1O75460 977 aaKnown RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 VAMP5O95183 116 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 SERPING1P05155 500 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 PCCAP05165 728 aaPredicted RBP2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 CDH1P12830 882 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 IFI30P13284 250 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 CCL2P13500 99 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 NR4A1P22736 598 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 HOXC8P31273 242 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 MAGEA2P43356 314 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 KCNJ1P48048 391 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 EMP2P54851 167 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 NCALDP61601 193 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 BNC1Q01954 994 aa2.98□□□□□ -1.93
SNRNP48-202ENST00000496946 HSF2Q03933 536 aa2.98□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms