RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 OR3A3P47888 321 aa3□□□□□ -1.93
CD46-218ENST00000496723 ATP4BP51164 291 aa3□□□□□ -1.93
CD46-218ENST00000496723 NDUFV3P56181 108 aaKnown RBP3□□□□□ -1.93
CD46-218ENST00000496723 GRB14Q14449 540 aa3□□□□□ -1.93
CD46-218ENST00000496723 LRRC37A5PQ49AS3 106 aa3□□□□□ -1.93
CD46-218ENST00000496723 HIGD2BQ4VC39 106 aa3□□□□□ -1.93
CD46-218ENST00000496723 SPOUT1Q5T280 376 aaKnown RBP3□□□□□ -1.93
CD46-218ENST00000496723 TXNRD3NBQ6F5E7 133 aa3□□□□□ -1.93
CD46-218ENST00000496723 TIPARPQ7Z3E1 657 aaKnown RBP3□□□□□ -1.93
CD46-218ENST00000496723 PHLDB2Q86SQ0 1253 aa3□□□□□ -1.93
CD46-218ENST00000496723 PHC2Q8IXK0 858 aa3□□□□□ -1.93
CD46-218ENST00000496723 ZC3H3Q8IXZ2 948 aaKnown RBP3□□□□□ -1.93
CD46-218ENST00000496723 TIGD4Q8IY51 512 aa3□□□□□ -1.93
CD46-218ENST00000496723 DND1Q8IYX4 353 aaKnown RBP3□□□□□ -1.93
CD46-218ENST00000496723 LINC00612Q8N6U2 182 aa3□□□□□ -1.93
CD46-218ENST00000496723 OR5M9Q8NGP3 310 aa3□□□□□ -1.93
CD46-218ENST00000496723 SETD6Q8TBK2 473 aa3□□□□□ -1.93
CD46-218ENST00000496723 SNRNP27Q8WVK2 155 aaKnown RBP3□□□□□ -1.93
CD46-218ENST00000496723 EXOC4Q96A65 974 aa3□□□□□ -1.93
CD46-218ENST00000496723 NACAP1Q9BZK3 213 aa3□□□□□ -1.93
CD46-218ENST00000496723 DPEP2Q9H4A9 486 aa3□□□□□ -1.93
CD46-218ENST00000496723 LMAN1LQ9HAT1 526 aa3□□□□□ -1.93
CD46-218ENST00000496723 IL1RAPQ9NPH3 570 aa3□□□□□ -1.93
CD46-218ENST00000496723 TMOD3Q9NYL9 352 aa3□□□□□ -1.93
CD46-218ENST00000496723 PILRAQ9UKJ1 303 aa3□□□□□ -1.93
CD46-218ENST00000496723 MRPS18CQ9Y3D5 142 aaKnown RBP3□□□□□ -1.93
CD46-218ENST00000496723 STYXL1Q9Y6J8 313 aa3□□□□□ -1.93
CD46-218ENST00000496723 AGRNO00468 2067 aa3□□□□□ -1.93
CD46-218ENST00000496723 HTR3EA5X5Y0 456 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 ARHGEF33A8MVX0 844 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 TCP10L2B9ZVM9 353 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 PDHXO00330 501 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 MLNRO43193 412 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 GALR3O60755 368 aaPredicted RBP2.99□□□□□ -1.93
CD46-218ENST00000496723 QDPRP09417 244 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 ANKRD34CP0C6C1 535 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 ADORA3P0DMS8 318 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 DLATP10515 647 aaKnown RBP2.99□□□□□ -1.93
CD46-218ENST00000496723 CTNNA2P26232 953 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 PIK3R1P27986 724 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 FEN1P39748 380 aaKnown RBP2.99□□□□□ -1.93
CD46-218ENST00000496723 ZFP36L2P47974 494 aaKnown RBP2.99□□□□□ -1.93
CD46-218ENST00000496723 PEX6Q13608 980 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.99□□□□□ -1.93
CD46-218ENST00000496723 TRAT1Q6PIZ9 186 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 C15orf52Q6ZUT6 534 aaKnown RBP2.99□□□□□ -1.93
CD46-218ENST00000496723 SPATA19Q7Z5L4 167 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 CATSPER3Q86XQ3 398 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 DZIP1Q86YF9 867 aaKnown RBP2.99□□□□□ -1.93
CD46-218ENST00000496723 HPS6Q86YV9 775 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 SSC4DQ8WTU2 575 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 RIT1Q92963 219 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 TSSK2Q96PF2 358 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 GBP5Q96PP8 586 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 INTS14Q96SY0 518 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 PCDHB18PQ96TA0 734 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 UBAC1Q9BSL1 405 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 ADNPQ9H2P0 1102 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 UBQLN3Q9H347 655 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 C5orf66Q9H5L9 145 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 JPT2Q9H910 190 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 GPR83Q9NYM4 423 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 GIMAP2Q9UG22 337 aa2.99□□□□□ -1.93
CD46-218ENST00000496723 OGTO15294 1046 aa2.98□□□□□ -1.93
CD46-218ENST00000496723 ZNF749O43361 778 aa2.98□□□□□ -1.93
CD46-218ENST00000496723 TNFSF12O43508 249 aa2.98□□□□□ -1.93
CD46-218ENST00000496723 BCL2L11O43521 198 aa2.98□□□□□ -1.93
CD46-218ENST00000496723 ABCE1P61221 599 aaKnown RBP2.98□□□□□ -1.93
CD46-218ENST00000496723 GCKRQ14397 625 aa2.98□□□□□ -1.93
CD46-218ENST00000496723 PPA1Q15181 289 aa2.98□□□□□ -1.93
CD46-218ENST00000496723 MLF2Q15773 248 aaPredicted RBP2.98□□□□□ -1.93
CD46-218ENST00000496723 CDO1Q16878 200 aa2.98□□□□□ -1.93
CD46-218ENST00000496723 C15orf32Q32M92 178 aa2.98□□□□□ -1.93
CD46-218ENST00000496723 FAM182AQ5T1J6 154 aa2.98□□□□□ -1.93
CD46-218ENST00000496723 KLHL10Q6JEL2 608 aa2.98□□□□□ -1.93
CD46-218ENST00000496723 Q6ZVQ6 151 aa2.98□□□□□ -1.93
CD46-218ENST00000496723 Q71RC1 249 aaPredicted RBP2.98□□□□□ -1.93
CD46-218ENST00000496723 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.98□□□□□ -1.93
CD46-218ENST00000496723 BSCL2Q96G97 398 aaPredicted RBP2.98□□□□□ -1.93
CD46-218ENST00000496723 ZNF414Q96IQ9 312 aa2.98□□□□□ -1.93
CD46-218ENST00000496723 PSMB7Q99436 277 aa2.98□□□□□ -1.93
CD46-218ENST00000496723 CCDC28BQ9BUN5 200 aa2.98□□□□□ -1.93
CD46-218ENST00000496723 MINDY3Q9H8M7 445 aa2.98□□□□□ -1.93
CD46-218ENST00000496723 FAM120CQ9NX05 1096 aaKnown RBP2.98□□□□□ -1.93
CD46-218ENST00000496723 DBF4Q9UBU7 674 aaPredicted RBP2.98□□□□□ -1.93
CD46-218ENST00000496723 NOCTQ9UK39 431 aaKnown RBP2.98□□□□□ -1.93
CD46-218ENST00000496723 GMEB2Q9UKD1 530 aa2.98□□□□□ -1.93
CD46-218ENST00000496723 TP53TG3Q9ULZ0 132 aa2.98□□□□□ -1.93
CD46-218ENST00000496723 C5orf52A6NGY3 159 aa2.97□□□□□ -1.93
CD46-218ENST00000496723 LMO7DNF2Z398 122 aa2.97□□□□□ -1.93
CD46-218ENST00000496723 INPP4BO15327 924 aa2.97□□□□□ -1.93
CD46-218ENST00000496723 TIMM44O43615 452 aa2.97□□□□□ -1.93
CD46-218ENST00000496723 HPP00738 406 aa2.97□□□□□ -1.93
CD46-218ENST00000496723 GP9P14770 177 aa2.97□□□□□ -1.93
CD46-218ENST00000496723 BCL3P20749 454 aa2.97□□□□□ -1.93
CD46-218ENST00000496723 TIA1P31483 386 aaKnown RBP eCLIP2.97□□□□□ -1.931e-8■■■■■ 30.1
CD46-218ENST00000496723 GP5P40197 560 aa2.97□□□□□ -1.93
CD46-218ENST00000496723 SRPXP78539 464 aa2.97□□□□□ -1.93
CD46-218ENST00000496723 TFCP2Q12800 502 aa2.97□□□□□ -1.93
CD46-218ENST00000496723 ABRQ12979 859 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms