RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 ROPN1Q9HAT0 212 aaPredicted RBP9.3□□□□□ -0.92
CALD1-223ENST00000496024 MKKSQ9NPJ1 570 aaPredicted RBP9.3□□□□□ -0.92
CALD1-223ENST00000496024 P4HTMQ9NXG6 502 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 NXT1Q9UKK6 140 aaKnown RBP9.3□□□□□ -0.92
CALD1-223ENST00000496024 EMCNQ9ULC0 261 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 MKL2Q9ULH7 1088 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 RNF11Q9Y3C5 154 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 DOCK10Q96BY6 2186 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 TNRC6AQ8NDV7 1962 aaKnown RBP9.3□□□□□ -0.92
CALD1-223ENST00000496024 KALRNO60229 2985 aa9.3□□□□□ -0.92
CALD1-223ENST00000496024 BOD1L1Q8NFC6 3051 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 IGLV3-12A0A075B6K2 115 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 LRIT2A6NDA9 550 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 IDSB3KWA1 339 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 SAP18O00422 153 aaKnown RBP9.29□□□□□ -0.92
CALD1-223ENST00000496024 PPP6CO00743 305 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 CHST10O43529 356 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 SPAG7O75391 227 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 CDC123O75794 336 aaPredicted RBP9.29□□□□□ -0.92
CALD1-223ENST00000496024 SUPT7LO94864 414 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 BMP10O95393 424 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 CLDN9O95484 217 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 RPS17P08708 135 aaKnown RBP9.29□□□□□ -0.92
CALD1-223ENST00000496024 MYL2P10916 166 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 MMP11P24347 488 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 CRHR1P34998 444 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 SKP1P63208 163 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 KCNAB2Q13303 367 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 RAPSNQ13702 412 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 RASA2Q15283 850 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 UNC50Q53HI1 259 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 SGO1Q5FBB7 561 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 LIPJQ5W064 366 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 FAM219BQ5XKK7 198 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 TTC19Q6DKK2 380 aaPredicted RBP9.29□□□□□ -0.92
CALD1-223ENST00000496024 TRIM40Q6P9F5 258 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 MILR1Q7Z6M3 343 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 TRABD2AQ86V40 505 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 CNPY4Q8N129 248 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 CCNYL1Q8N7R7 359 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 HUS1BQ8NHY5 278 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 ZNF483Q8TF39 744 aaPredicted RBP9.29□□□□□ -0.92
CALD1-223ENST00000496024 ZNF473Q8WTR7 871 aaKnown RBP9.29□□□□□ -0.92
CALD1-223ENST00000496024 GAL3ST3Q96A11 431 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 MS4A6EQ96DS6 147 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 TMEM237Q96Q45 408 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 REXO4Q9GZR2 422 aaKnown RBP9.29□□□□□ -0.92
CALD1-223ENST00000496024 IQCGQ9H095 443 aaKnown RBP9.29□□□□□ -0.92
CALD1-223ENST00000496024 CENPHQ9H3R5 247 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 ZBTB26Q9HCK0 441 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 RRAGDQ9NQL2 400 aaPredicted RBP9.29□□□□□ -0.92
CALD1-223ENST00000496024 ZNF71Q9NQZ8 489 aaPredicted RBP9.29□□□□□ -0.92
CALD1-223ENST00000496024 SEMA3GQ9NS98 782 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 C14orf105Q9NVL8 296 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 FBXL4Q9UKA2 621 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 GRID1Q9ULK0 1009 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 HS3ST3B1Q9Y662 390 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 COL6A6A6NMZ7 2263 aa9.29□□□□□ -0.92
CALD1-223ENST00000496024 A0A1B0GTL3 188 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 FAM227AF5H4B4 570 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 G3V2L1 256 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 AGPSO00116 658 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 PSMD12O00232 456 aaPredicted RBP9.28□□□□□ -0.92
CALD1-223ENST00000496024 RTCAO00442 366 aaKnown RBP9.28□□□□□ -0.92
CALD1-223ENST00000496024 SOCS6O14544 535 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 PLIN3O60664 434 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 B4GALT2O60909 372 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 TBX6O95947 436 aaPredicted RBP9.28□□□□□ -0.92
CALD1-223ENST00000496024 IGHEP01854 428 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 PROCP04070 461 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 SMIM10L1P0DMW3 83 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 NR1D1P20393 614 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 GSTM2P28161 218 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 NEK2P51955 445 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 EFNA3P52797 238 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 PRKAA2P54646 552 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 RRADP55042 308 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 RPS13P62277 151 aaKnown RBP9.28□□□□□ -0.92
CALD1-223ENST00000496024 HERVK_113P63132 956 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 CLCQ05315 142 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 EEF1A2Q05639 463 aaKnown RBP9.28□□□□□ -0.92
CALD1-223ENST00000496024 SLC18A2Q05940 514 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 PCDH1Q08174 1060 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 ZNF844Q08AG5 666 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 TRAF3Q13114 568 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 ZRSR2Q15696 482 aaKnown RBP9.28□□□□□ -0.92
CALD1-223ENST00000496024 ZNF678Q5SXM1 525 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 CEP85LQ5SZL2 805 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 METTL2BQ6P1Q9 378 aaKnown RBP9.28□□□□□ -0.92
CALD1-223ENST00000496024 ABHD17CQ6PCB6 329 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 KIRREL2Q6UWL6 708 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 ZYG11AQ6WRX3 759 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 MED25Q71SY5 747 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 SLC22A9Q8IVM8 553 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 LAS2Q8IYD9 372 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 L3MBTL4Q8NA19 623 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 OR2L5Q8NG80 312 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 OR4F6Q8NGB9 312 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 ABHD17AQ96GS6 310 aa9.28□□□□□ -0.92
CALD1-223ENST00000496024 SMIM10Q96HG1 83 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms