RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 SCN3AQ9NY46 2000 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 NBEAQ8NFP9 2946 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 ZNF860A6NHJ4 632 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 PSMD12O00232 456 aaPredicted RBP11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 GALR3O60755 368 aaPredicted RBP11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 TRIM13O60858 407 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 RDH16O75452 317 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 CRCPO75575 148 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 KLF7O75840 302 aaPredicted RBP11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 TGFB1P01137 390 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 IGHEP01854 428 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 PTX3P26022 381 aaPredicted RBP11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 HNRNPH1P31943 449 aaKnown RBP11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 RAP1GDS1P52306 607 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 PLA2G16P53816 162 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 BTN3A2P78410 334 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 MAT1AQ00266 395 aaKnown RBP11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 HYAL2Q12891 473 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 TRAF3Q13114 568 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 SYT16Q17RD7 645 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 GGTA1PQ4G0N0 100 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 TMEM35AQ53FP2 167 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 VWA2Q5GFL6 755 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 ADNP2Q6IQ32 1131 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 SHISA6Q6ZSJ9 500 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 GPRIN3Q6ZVF9 776 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 C10orf107Q8IVU9 208 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 PRSS58Q8IYP2 241 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 GOLGA6L1Q8N7Z2 621 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 ZNF473Q8WTR7 871 aaKnown RBP11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 THAP4Q8WY91 577 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 MTFMTQ96DP5 389 aaKnown RBP11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 MS4A6EQ96DS6 147 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 IP6K3Q96PC2 410 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 KCNC2Q96PR1 638 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 F2RL3Q96RI0 385 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 ZNF382Q96SR6 550 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 MTERF1Q99551 399 aaKnown RBP11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 CRB3Q9BUF7 120 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 ROGDIQ9GZN7 287 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 SSU72Q9NP77 194 aaKnown RBP11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 DMRT3Q9NQL9 472 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 ACSS2Q9NR19 701 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 SLC17A7Q9P2U7 560 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 TRPS1Q9UHF7 1281 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 LHX6Q9UPM6 363 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 TSC22D4Q9Y3Q8 395 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 LOC400499M0QZD8 3231 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 ITPR1Q14643 2758 aa11.45□□□□□ -0.58
CSNK1E-213ENST00000495232 PKD1L2Q7Z442 2459 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 A0A0G2JN53 185 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 VSTM2BA6NLU5 285 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 H3BQF6 201 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 FOXE1O00358 373 aaPredicted RBP11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 PEX12O00623 359 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 FFAR3O14843 346 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 TM9SF1O15321 606 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 GPR42O15529 346 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 B3GALT2O43825 422 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 TYROBPO43914 113 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 SH3BGRLO75368 114 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 OR4F21O95013 312 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 ZWINTO95229 277 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 KRT6AP02538 564 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 KRT6BP04259 564 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 ITGB2P05107 769 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 HEXBP07686 556 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 SMIM10L1P0DMW3 83 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 CREB1P16220 341 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 IL10P22301 178 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 HMOX2P30519 316 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 XCR1P46094 333 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 KRT6CP48668 564 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 PKNOX1P55347 436 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 RHDQ02161 417 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 KLC1Q07866 573 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 IL10RAQ13651 578 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 PCLAFQ15004 111 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 AP5B1Q2VPB7 878 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 DEFB109BQ30KR1 87 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 MINDY4Q4G0A6 757 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 ATP1A1-AS1Q5TC04 95 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 FAM69BQ5VUD6 431 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 KHDRBS2Q5VWX1 349 aaKnown RBP11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 FRG2Q64ET8 278 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 LETMD1Q6P1Q0 360 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 BORAQ6PGQ7 559 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 VN1R5Q7Z5H4 357 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 PDSS2Q86YH6 399 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 CDYL2Q8N8U2 506 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 AMER3Q8N944 861 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 METTL6Q8TCB7 284 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 RGMAQ96B86 450 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 PEX11GQ96HA9 241 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 SMIM10Q96HG1 83 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 FRG2BQ96QU4 278 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 SERINC2Q96SA4 455 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 ARHGAP9Q9BRR9 750 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 MS4A8Q9BY19 250 aa11.44□□□□□ -0.58
CSNK1E-213ENST00000495232 TGIF2Q9GZN2 237 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms