RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 RNH1P13489 461 aaKnown RBP16.64■□□□□ 0.25
HDAC4-211ENST00000494800 SERPINB1P30740 379 aa16.64■□□□□ 0.25
HDAC4-211ENST00000494800 PIK3CGP48736 1102 aa16.64■□□□□ 0.25
HDAC4-211ENST00000494800 ALDH18A1P54886 795 aaKnown RBP16.64■□□□□ 0.25
HDAC4-211ENST00000494800 ACTN3Q08043 901 aaPredicted RBP16.64■□□□□ 0.25
HDAC4-211ENST00000494800 HYAL2Q12891 473 aa16.64■□□□□ 0.25
HDAC4-211ENST00000494800 ABRAXAS2Q15018 415 aa16.64■□□□□ 0.25
HDAC4-211ENST00000494800 PCOLCEQ15113 449 aa16.64■□□□□ 0.25
HDAC4-211ENST00000494800 PFKFB4Q16877 469 aa16.64■□□□□ 0.25
HDAC4-211ENST00000494800 UBAP2Q5T6F2 1119 aaKnown RBP16.64■□□□□ 0.25
HDAC4-211ENST00000494800 IQCKQ8N0W5 287 aa16.64■□□□□ 0.25
HDAC4-211ENST00000494800 UHMK1Q8TAS1 419 aaKnown RBP16.64■□□□□ 0.25
HDAC4-211ENST00000494800 PPP4R1Q8TF05 950 aa16.64■□□□□ 0.25
HDAC4-211ENST00000494800 LMF1Q96S06 567 aa16.64■□□□□ 0.25
HDAC4-211ENST00000494800 WDR77Q9BQA1 342 aaPredicted RBP16.64■□□□□ 0.25
HDAC4-211ENST00000494800 MESP1Q9BRJ9 268 aa16.64■□□□□ 0.25
HDAC4-211ENST00000494800 REXO4Q9GZR2 422 aaKnown RBP16.64■□□□□ 0.25
HDAC4-211ENST00000494800 COPS7BQ9H9Q2 264 aaPredicted RBP16.64■□□□□ 0.25
HDAC4-211ENST00000494800 MAP10Q9P2G4 905 aa16.64■□□□□ 0.25
HDAC4-211ENST00000494800 TEKT2Q9UIF3 430 aa16.64■□□□□ 0.25
HDAC4-211ENST00000494800 TMCO1Q9UM00 188 aa16.64■□□□□ 0.25
HDAC4-211ENST00000494800 CCDC88CQ9P219 2028 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 NUP210LQ5VU65 1888 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 LRIT2A6NDA9 550 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 MAGEB17A8MXT2 336 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 ERI3O43414 337 aaKnown RBP16.63■□□□□ 0.25
HDAC4-211ENST00000494800 VPS4BO75351 444 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 SNRPAP09012 282 aaKnown RBP16.63■□□□□ 0.25
HDAC4-211ENST00000494800 SMIM10L1P0DMW3 83 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 CASP2P42575 452 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 OLR1P78380 273 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 BTN3A2P78410 334 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 Q0VFX4 171 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 MFAP5Q13361 173 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 RCN2Q14257 317 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 SETDB1Q15047 1291 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 EXT1Q16394 746 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 METTL2BQ6P1Q9 378 aaKnown RBP16.63■□□□□ 0.25
HDAC4-211ENST00000494800 MED27Q6P2C8 311 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 LINC00696Q6ZRV3 163 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 ANKRD37Q7Z713 158 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 PLPP5Q8NEB5 264 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 SRFBP1Q8NEF9 429 aaKnown RBP16.63■□□□□ 0.25
HDAC4-211ENST00000494800 ARMC2Q8NEN0 867 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 OR2L5Q8NG80 312 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 ADAMTS18Q8TE60 1221 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 ISL2Q96A47 359 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 MTBPQ96DY7 904 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 SMIM10Q96HG1 83 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 SCYL1Q96KG9 808 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 NPLQ9BXD5 320 aaPredicted RBP16.63■□□□□ 0.25
HDAC4-211ENST00000494800 ROGDIQ9GZN7 287 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 RHBGQ9H310 441 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 KLHL31Q9H511 634 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 CPSF2Q9P2I0 782 aaKnown RBP16.63■□□□□ 0.25
HDAC4-211ENST00000494800 VPS4AQ9UN37 437 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 BAHCC1Q9P281 2608 aa16.63■□□□□ 0.25
HDAC4-211ENST00000494800 DYTNA2CJ06 578 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 TRIM49D1C9J1S8 452 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 B3GALT2O43825 422 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 PRMT3O60678 531 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 B4GALT2O60909 372 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 SMIM24O75264 130 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 SEC24DO94855 1032 aaPredicted RBP16.62■□□□□ 0.25
HDAC4-211ENST00000494800 MTHFD2P13995 350 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 RHAGQ02094 409 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 NAA30Q147X3 362 aaPredicted RBP16.62■□□□□ 0.25
HDAC4-211ENST00000494800 IGFBP7Q16270 282 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 BTBD16Q32M84 506 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 IGFL2Q6UWQ7 119 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 LANCL3Q6ZV70 420 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 MYLK4Q86YV6 388 aaPredicted RBP16.62■□□□□ 0.25
HDAC4-211ENST00000494800 TEX9Q8N6V9 391 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 EIF1ADQ8N9N8 165 aaKnown RBP16.62■□□□□ 0.25
HDAC4-211ENST00000494800 DNAJB14Q8TBM8 379 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 BRIX1Q8TDN6 353 aaKnown RBP16.62■□□□□ 0.25
HDAC4-211ENST00000494800 DCAKDQ8WVC6 231 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 MIB2Q96AX9 1013 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 MS4A6EQ96DS6 147 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 LPAR4Q99677 370 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 CCDC77Q9BR77 488 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 SLC29A3Q9BZD2 475 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 LANCL2Q9NS86 450 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 LUZP4Q9P127 313 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 PTGFRNQ9P2B2 879 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 ADGRE2Q9UHX3 823 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 PLAAQ9Y263 795 aa16.62■□□□□ 0.25
HDAC4-211ENST00000494800 MRPS33Q9Y291 106 aaKnown RBP16.62■□□□□ 0.25
HDAC4-211ENST00000494800 MED13Q9UHV7 2174 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 TNRC6AQ8NDV7 1962 aaKnown RBP16.61■□□□□ 0.25
HDAC4-211ENST00000494800 RIPK2O43353 540 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 B3GALT4O96024 378 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 PCNAP12004 261 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 EPORP19235 508 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 HNRNPH1P31943 449 aaKnown RBP16.61■□□□□ 0.25
HDAC4-211ENST00000494800 MAGEA12P43365 314 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 PLA2G16P53816 162 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 OR4D2P58180 307 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 ARG2P78540 354 aa16.61■□□□□ 0.25
HDAC4-211ENST00000494800 PHEXP78562 749 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms