RNA–Protein interactions for RNA: ENST00000494546.1

CBX4-203, Transcript of chromobox 4, humanhuman

TSL 3

Gene CBX4, Length 432 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-203ENST00000494546 ACTN3Q08043 901 aaPredicted RBP31.27■■■□□ 2.6
CBX4-203ENST00000494546 SFT2D3Q587I9 215 aa31.27■■■□□ 2.6
CBX4-203ENST00000494546 KCTD4Q8WVF5 259 aa31.27■■■□□ 2.6
CBX4-203ENST00000494546 SMIM10Q96HG1 83 aa31.27■■■□□ 2.6
CBX4-203ENST00000494546 MAGEB10Q96LZ2 347 aaPredicted RBP31.27■■■□□ 2.6
CBX4-203ENST00000494546 RHBGQ9H310 441 aa31.27■■■□□ 2.6
CBX4-203ENST00000494546 EHD1Q9H4M9 534 aa31.27■■■□□ 2.6
CBX4-203ENST00000494546 NT5DC2Q9H857 520 aa31.27■■■□□ 2.6
CBX4-203ENST00000494546 FLNBO75369 2602 aaKnown RBP31.26■■■□□ 2.59
CBX4-203ENST00000494546 CLEC18AA5D8T8 446 aa31.26■■■□□ 2.59
CBX4-203ENST00000494546 ANKDD1BA6NHY2 528 aa31.26■■■□□ 2.59
CBX4-203ENST00000494546 MAGEB17A8MXT2 336 aa31.26■■■□□ 2.59
CBX4-203ENST00000494546 PRAMEF4O60810 478 aa31.26■■■□□ 2.59
CBX4-203ENST00000494546 KERAO60938 352 aa31.26■■■□□ 2.59
CBX4-203ENST00000494546 IRF9Q00978 393 aa31.26■■■□□ 2.59
CBX4-203ENST00000494546 MRPL49Q13405 166 aaKnown RBP31.26■■■□□ 2.59
CBX4-203ENST00000494546 PRAMEF9Q5VWM5 478 aa31.26■■■□□ 2.59
CBX4-203ENST00000494546 PLAG1Q6DJT9 500 aa31.26■■■□□ 2.59
CBX4-203ENST00000494546 CLEC18BQ6UXF7 455 aa31.26■■■□□ 2.59
CBX4-203ENST00000494546 RELL1Q8IUW5 271 aa31.26■■■□□ 2.59
CBX4-203ENST00000494546 CLEC18CQ8NCF0 446 aa31.26■■■□□ 2.59
CBX4-203ENST00000494546 PTCD3Q96EY7 689 aaKnown RBP31.26■■■□□ 2.59
CBX4-203ENST00000494546 FAR2Q96K12 515 aa31.26■■■□□ 2.59
CBX4-203ENST00000494546 ATOH8Q96SQ7 321 aa31.26■■■□□ 2.59
CBX4-203ENST00000494546 FMO2Q99518 471 aa31.26■■■□□ 2.59
CBX4-203ENST00000494546 CD244Q9BZW8 370 aa31.26■■■□□ 2.59
CBX4-203ENST00000494546 CDC42EP4Q9H3Q1 356 aaKnown RBP31.26■■■□□ 2.59
CBX4-203ENST00000494546 ACSS3Q9H6R3 686 aa31.26■■■□□ 2.59
CBX4-203ENST00000494546 CLK4Q9HAZ1 481 aaKnown RBP31.26■■■□□ 2.59
CBX4-203ENST00000494546 SNX15Q9NRS6 342 aa31.26■■■□□ 2.59
CBX4-203ENST00000494546 NTNG1Q9Y2I2 539 aa31.26■■■□□ 2.59
CBX4-203ENST00000494546 ASB1Q9Y576 335 aa31.26■■■□□ 2.59
CBX4-203ENST00000494546 A0A087X1B8 175 aa31.25■■■□□ 2.59
CBX4-203ENST00000494546 A0A0G2JN53 185 aa31.25■■■□□ 2.59
CBX4-203ENST00000494546 HMX2A2RU54 273 aa31.25■■■□□ 2.59
CBX4-203ENST00000494546 UBXN8O00124 270 aa31.25■■■□□ 2.59
CBX4-203ENST00000494546 PSMD12O00232 456 aaPredicted RBP31.25■■■□□ 2.59
CBX4-203ENST00000494546 ACSL3O95573 720 aa31.25■■■□□ 2.59
CBX4-203ENST00000494546 C2P06681 752 aa31.25■■■□□ 2.59
CBX4-203ENST00000494546 GSTM2P28161 218 aa31.25■■■□□ 2.59
CBX4-203ENST00000494546 BTN3A2P78410 334 aa31.25■■■□□ 2.59
CBX4-203ENST00000494546 DOC2AQ14183 400 aa31.25■■■□□ 2.59
CBX4-203ENST00000494546 NR6A1Q15406 480 aa31.25■■■□□ 2.59
CBX4-203ENST00000494546 GLE1Q53GS7 698 aaKnown RBP31.25■■■□□ 2.59
CBX4-203ENST00000494546 PAPD4Q6PIY7 484 aaKnown RBP31.25■■■□□ 2.59
CBX4-203ENST00000494546 LRRC70Q7Z2Q7 622 aa31.25■■■□□ 2.59
CBX4-203ENST00000494546 GAL3ST3Q96A11 431 aa31.25■■■□□ 2.59
CBX4-203ENST00000494546 PITHD1Q9GZP4 211 aaPredicted RBP31.25■■■□□ 2.59
CBX4-203ENST00000494546 TSPYL1Q9H0U9 437 aa31.25■■■□□ 2.59
CBX4-203ENST00000494546 COPG2Q9UBF2 871 aa31.25■■■□□ 2.59
CBX4-203ENST00000494546 A8MUI8 341 aa31.24■■■□□ 2.59
CBX4-203ENST00000494546 F10P00742 488 aa31.24■■■□□ 2.59
CBX4-203ENST00000494546 RNH1P13489 461 aaKnown RBP31.24■■■□□ 2.59
CBX4-203ENST00000494546 HNRNPH1P31943 449 aaKnown RBP31.24■■■□□ 2.59
CBX4-203ENST00000494546 TSFMP43897 325 aaKnown RBP31.24■■■□□ 2.59
CBX4-203ENST00000494546 OR4D2P58180 307 aa31.24■■■□□ 2.59
CBX4-203ENST00000494546 ABHD17BQ5VST6 288 aa31.24■■■□□ 2.59
CBX4-203ENST00000494546 CCDC91Q7Z6B0 441 aa31.24■■■□□ 2.59
CBX4-203ENST00000494546 CENPLQ8N0S6 344 aaPredicted RBP31.24■■■□□ 2.59
CBX4-203ENST00000494546 OR1N1Q8NGS0 311 aa31.24■■■□□ 2.59
CBX4-203ENST00000494546 KIF18AQ8NI77 898 aa31.24■■■□□ 2.59
CBX4-203ENST00000494546 PTCHD1Q96NR3 888 aa31.24■■■□□ 2.59
CBX4-203ENST00000494546 LPAR4Q99677 370 aa31.24■■■□□ 2.59
CBX4-203ENST00000494546 EFCAB11Q9BUY7 163 aa31.24■■■□□ 2.59
CBX4-203ENST00000494546 LRIT2A6NDA9 550 aa31.23■■■□□ 2.59
CBX4-203ENST00000494546 ERI3O43414 337 aaKnown RBP31.23■■■□□ 2.59
CBX4-203ENST00000494546 CLEC3AO75596 197 aa31.23■■■□□ 2.59
CBX4-203ENST00000494546 EPORP19235 508 aa31.23■■■□□ 2.59
CBX4-203ENST00000494546 IRF8Q02556 426 aa31.23■■■□□ 2.59
CBX4-203ENST00000494546 CHIT1Q13231 466 aa31.23■■■□□ 2.59
CBX4-203ENST00000494546 FAM83EQ2M2I3 478 aa31.23■■■□□ 2.59
CBX4-203ENST00000494546 FHL5Q5TD97 284 aa31.23■■■□□ 2.59
CBX4-203ENST00000494546 MS4A6EQ96DS6 147 aa31.23■■■□□ 2.59
CBX4-203ENST00000494546 SEC16BQ96JE7 1060 aa31.23■■■□□ 2.59
CBX4-203ENST00000494546 AGPAT4Q9NRZ5 378 aa31.23■■■□□ 2.59
CBX4-203ENST00000494546 TEKT2Q9UIF3 430 aa31.23■■■□□ 2.59
CBX4-203ENST00000494546 ZNF490Q9ULM2 529 aaPredicted RBP31.23■■■□□ 2.59
CBX4-203ENST00000494546 A0A096LPK6 155 aa31.22■■■□□ 2.59
CBX4-203ENST00000494546 FAM227AF5H4B4 570 aa31.22■■■□□ 2.59
CBX4-203ENST00000494546 PRMT3O60678 531 aa31.22■■■□□ 2.59
CBX4-203ENST00000494546 CD22P20273 847 aa31.22■■■□□ 2.59
CBX4-203ENST00000494546 TYK2P29597 1187 aa31.22■■■□□ 2.59
CBX4-203ENST00000494546 BTG2P78543 158 aa31.22■■■□□ 2.59
CBX4-203ENST00000494546 ZNF33BQ06732 778 aa31.22■■■□□ 2.59
CBX4-203ENST00000494546 EXT1Q16394 746 aa31.22■■■□□ 2.59
CBX4-203ENST00000494546 EIF2S3LQ2VIR3 472 aaKnown RBP31.22■■■□□ 2.59
CBX4-203ENST00000494546 ADNP2Q6IQ32 1131 aa31.22■■■□□ 2.59
CBX4-203ENST00000494546 VN1R5Q7Z5H4 357 aa31.22■■■□□ 2.59
CBX4-203ENST00000494546 CA13Q8N1Q1 262 aa31.22■■■□□ 2.59
CBX4-203ENST00000494546 HAS2Q92819 552 aa31.22■■■□□ 2.59
CBX4-203ENST00000494546 WDR34Q96EX3 536 aa31.22■■■□□ 2.59
CBX4-203ENST00000494546 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP31.22■■■□□ 2.592e-8■■■□□ 18.6
CBX4-203ENST00000494546 KCNK13Q9HB14 408 aa31.22■■■□□ 2.59
CBX4-203ENST00000494546 PRM3Q9NNZ6 103 aa31.22■■■□□ 2.59
CBX4-203ENST00000494546 STMN3Q9NZ72 180 aa31.22■■■□□ 2.59
CBX4-203ENST00000494546 SYCE1LA8MT33 242 aa31.21■■■□□ 2.59
CBX4-203ENST00000494546 WDPCPO95876 746 aa31.21■■■□□ 2.59
CBX4-203ENST00000494546 ECHS1P30084 290 aa31.21■■■□□ 2.59
CBX4-203ENST00000494546 SERPINB8P50452 374 aa31.21■■■□□ 2.59
CBX4-203ENST00000494546 LAPTM5Q13571 262 aa31.21■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms