RNA–Protein interactions for RNA: ENST00000493923.1

HDAC6-234, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 404 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-234ENST00000493923 ALPK1Q96QP1 1244 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 SNX18Q96RF0 628 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 TCF12Q99081 682 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 PAFAH2Q99487 392 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 ZPBPQ9BS86 351 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 RAB33BQ9H082 229 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 XKR8Q9H6D3 395 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 RUBCNLQ9H714 662 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 CXorf21Q9HAI6 301 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 NPAP1Q9NZP6 1156 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 COPG2Q9UBF2 871 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 DRG1Q9Y295 367 aaKnown RBP7.85□□□□□ -1.15
HDAC6-234ENST00000493923 TP53TG5Q9Y2B4 290 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 HEMK1Q9Y5R4 338 aaPredicted RBP7.85□□□□□ -1.15
HDAC6-234ENST00000493923 KCNMB2Q9Y691 235 aa7.85□□□□□ -1.15
HDAC6-234ENST00000493923 MDC1Q14676 2089 aaKnown RBP7.85□□□□□ -1.15
HDAC6-234ENST00000493923 IGLV3-16A0A075B6K0 115 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 FAM237BA0A1B0GVD1 139 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 CDC14CA4D256 554 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 SLC9B1P1A6NJY1 282 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 C2orf81A6NN90 581 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 FAM25EA8MYX2 175 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 H3BMQ9 156 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 TOX3O15405 576 aaPredicted RBP7.84□□□□□ -1.15
HDAC6-234ENST00000493923 TSPAN9O75954 239 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 ANXA9O76027 345 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 MYO1DO94832 1006 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 TFPTP0C1Z6 253 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 ETS1P14921 441 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 ST6GAL1P15907 406 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 TCN2P20062 427 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 IL12AP29459 219 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 EEF1DP29692 281 aaKnown RBP7.84□□□□□ -1.15
HDAC6-234ENST00000493923 MC4RP32245 332 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 GRIA1P42261 906 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 CCR10P46092 362 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 PRLHRP49683 370 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 CSRP3P50461 194 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 BMXP51813 675 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 ALDH18A1P54886 795 aaKnown RBP7.84□□□□□ -1.15
HDAC6-234ENST00000493923 AQP5P55064 265 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 FOXL2P58012 376 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 SRSF1Q07955 248 aaKnown RBP eCLIP7.84□□□□□ -1.15
HDAC6-234ENST00000493923 CHAF1BQ13112 559 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 CBLBQ13191 982 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 ITGADQ13349 1161 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 TUBB3Q13509 450 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 IL10RAQ13651 578 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 FLOT2Q14254 428 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 PLCL1Q15111 1095 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 HIF1AQ16665 826 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 ZNF789Q5FWF6 425 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 OGFOD2Q6N063 350 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 ANKRD26P1Q6NSI1 321 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 BNC2Q6ZN30 1099 aaPredicted RBP7.84□□□□□ -1.15
HDAC6-234ENST00000493923 ATG14Q6ZNE5 492 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 SERPINA9Q86WD7 417 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 DEFB107AQ8IZN7 70 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 MYO1HQ8N1T3 1032 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 D2HGDHQ8N465 521 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 GLIS1Q8NBF1 620 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 AVL9Q8NBF6 648 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 SIDT2Q8NBJ9 832 aaKnown RBP7.84□□□□□ -1.15
HDAC6-234ENST00000493923 OR4E2Q8NGC2 313 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 C9orf43Q8TAL5 461 aaPredicted RBP7.84□□□□□ -1.15
HDAC6-234ENST00000493923 SLC35B2Q8TB61 432 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 MZB1Q8WU39 189 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 C1orf54Q8WWF1 131 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 CDKL2Q92772 493 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 KIAA1143Q96AT1 154 aaPredicted RBP7.84□□□□□ -1.15
HDAC6-234ENST00000493923 ZNF501Q96CX3 271 aaPredicted RBP7.84□□□□□ -1.15
HDAC6-234ENST00000493923 ZDHHC12Q96GR4 267 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 LINC00615Q96LM1 132 aaPredicted RBP7.84□□□□□ -1.15
HDAC6-234ENST00000493923 COG8Q96MW5 612 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 TMEM121Q9BTD3 319 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 HOXD1Q9GZZ0 328 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 OR52A5Q9H2C5 316 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 ADNPQ9H2P0 1102 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 ARMC7Q9H6L4 198 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 KIR3DX1Q9H7L2 352 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 COG4Q9H9E3 785 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 ARNT2Q9HBZ2 717 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 LHX9Q9NQ69 397 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 FGF21Q9NSA1 209 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 HRASLS2Q9NWW9 162 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 KCNN3Q9UGI6 736 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 SLC2A6Q9UGQ3 507 aa7.84□□□□□ -1.15
HDAC6-234ENST00000493923 DNMT3AQ9Y6K1 912 aaPredicted RBP7.84□□□□□ -1.15
HDAC6-234ENST00000493923 NOTCH2Q04721 2471 aa7.84□□□□□ -1.16
HDAC6-234ENST00000493923 CENPEQ02224 2701 aa7.83□□□□□ -1.16
HDAC6-234ENST00000493923 A0A1W2PPM1 405 aa7.83□□□□□ -1.16
HDAC6-234ENST00000493923 PIPSLA2A3N6 862 aa7.83□□□□□ -1.16
HDAC6-234ENST00000493923 TLCD2A6NGC4 264 aa7.83□□□□□ -1.16
HDAC6-234ENST00000493923 SAGE2PA6NJ88 616 aa7.83□□□□□ -1.16
HDAC6-234ENST00000493923 SAC3D1A6NKF1 404 aa7.83□□□□□ -1.16
HDAC6-234ENST00000493923 SNTNA6NMZ2 147 aa7.83□□□□□ -1.16
HDAC6-234ENST00000493923 H0YC42 278 aa7.83□□□□□ -1.16
HDAC6-234ENST00000493923 BTN3A1O00481 513 aa7.83□□□□□ -1.16
HDAC6-234ENST00000493923 DYRK3O43781 588 aa7.83□□□□□ -1.16
HDAC6-234ENST00000493923 KCNJ13O60928 360 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms