RNA–Protein interactions for RNA: ENST00000493795.5

BRCA1-221, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 5,732 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-221ENST00000493795 ZIM2Q9NZV7 527 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 MGAT4BQ9UQ53 548 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 A0A1B0GV50 99 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 GRXCR1A8MXD5 290 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 C2orf74A8MZ97 194 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 NPIPA2E9PIF3 369 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 F8W036 122 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 NPIPA3F8WFD2 350 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 ANKRD28O15084 1053 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 ZNF254O75437 659 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 OXTRP30559 389 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 MAT2AP31153 395 aaKnown RBP7.62□□□□□ -1.19
BRCA1-221ENST00000493795 THBS2P35442 1172 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 MAP2K3P46734 347 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 DGKGP49619 791 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 RPS3AP61247 264 aaKnown RBP7.62□□□□□ -1.19
BRCA1-221ENST00000493795 NCS1P62166 190 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 BLOC1S1P78537 153 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 CDK6Q00534 326 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 CYP27C1Q4G0S4 372 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 WDR53Q7Z5U6 358 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-221ENST00000493795 GTPBP8Q8N3Z3 284 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-221ENST00000493795 HSPBAP1Q96EW2 488 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 ARHGAP9Q9BRR9 750 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 TCEAL7Q9BRU2 100 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 HERC2P3Q9BVR0 1158 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 SAMD10Q9BYL1 202 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 MRM3Q9HC36 420 aaKnown RBP7.62□□□□□ -1.19
BRCA1-221ENST00000493795 TIGARQ9NQ88 270 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 HAO2Q9NYQ3 351 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 PTBP2Q9UKA9 531 aaKnown RBP7.62□□□□□ -1.19
BRCA1-221ENST00000493795 SCAMP1O15126 338 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 PIP5K1CO60331 668 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 SHOX2O60902 331 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-221ENST00000493795 OR2B3O76000 313 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 TNFP01375 233 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 SERPINA7P05543 415 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 KLK3P07288 261 aaPredicted RBP7.62□□□□□ -1.19
BRCA1-221ENST00000493795 SHMT1P34896 483 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 CDH15P55291 814 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 RNF4P78317 190 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 PPIGQ13427 754 aaKnown RBP eCLIP7.62□□□□□ -1.191e-6■■■□□ 19.2
BRCA1-221ENST00000493795 ZC3H14Q6PJT7 736 aaKnown RBP7.62□□□□□ -1.19
BRCA1-221ENST00000493795 TMEM205Q6UW68 189 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 TRAM1L1Q8N609 369 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 CDCA5Q96FF9 252 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 SLC41A3Q96GZ6 507 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 PAPOLGQ9BWT3 736 aaKnown RBP7.62□□□□□ -1.19
BRCA1-221ENST00000493795 EIF2B3Q9NR50 452 aaKnown RBP7.62□□□□□ -1.19
BRCA1-221ENST00000493795 FAM86C1Q9NVL1 165 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 POLLQ9UGP5 575 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 WDR45Q9Y484 360 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 ADAMTS12P58397 1594 aa7.62□□□□□ -1.19
BRCA1-221ENST00000493795 SLC15A5A6NIM6 579 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 B4DGG1 531 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 EEF1E1-BLOC1S5C9J1V9 151 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 H3BSA7 217 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 BOLA2-SMG1P6H3BVE0 249 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 ABCB7O75027 752 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 PSMD10O75832 226 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 LPLP06858 475 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 RHOP08100 348 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 ACTC1P68032 377 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 ACTA1P68133 377 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 TDGQ13569 410 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 PCBP2Q15366 365 aaKnown RBP eCLIP7.61□□□□□ -1.192e-7■■■□□ 17.1
BRCA1-221ENST00000493795 ZNF630Q2M218 657 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-221ENST00000493795 TMEM35AQ53FP2 167 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 PHF19Q5T6S3 580 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 KIAA1614Q5VZ46 1190 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 FAM198BQ6UWH4 519 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 LCLAT1Q6UWP7 414 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 DPY19L3Q6ZPD9 716 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 TRIM46Q7Z4K8 759 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 SH3RF1Q7Z6J0 888 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 FTMTQ8N4E7 242 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 IQCF1Q8N6M8 205 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 PLD5Q8N7P1 536 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 OR5B17Q8NGF7 314 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 OR13C3Q8NGS6 347 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 THAP4Q8WY91 577 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 GCDHQ92947 438 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-221ENST00000493795 ARL11Q969Q4 196 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 CGREF1Q99674 301 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 PCDHAC1Q9H158 963 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 BIVM-ERCC5R4GMW8 1640 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 A0A0G2JN53 185 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 ZNF705GA8MUZ8 300 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-221ENST00000493795 OIP5O43482 229 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 KLK1P06870 262 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 ZNF8P17098 575 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-221ENST00000493795 IMPDH1P20839 514 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 CERS1P27544 350 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 CASP6P55212 293 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 PMS2P3Q13401 168 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 CCDC71LQ8N9Z2 235 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 HOXB13Q92826 284 aaPredicted RBP7.61□□□□□ -1.19
BRCA1-221ENST00000493795 HSH2DQ96JZ2 352 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 WDR26Q9H7D7 661 aa7.61□□□□□ -1.19
BRCA1-221ENST00000493795 ZNF442Q9H7R0 627 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms