RNA–Protein interactions for RNA: ENST00000492977.5

PTPN7-216, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 1,595 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-216ENST00000492977 ZFPM2Q8WW38 1151 aa13.42□□□□□ -0.26
PTPN7-216ENST00000492977 N4BP2L2Q92802 583 aaPredicted RBP13.42□□□□□ -0.26
PTPN7-216ENST00000492977 SLC22A18Q96BI1 424 aa13.42□□□□□ -0.26
PTPN7-216ENST00000492977 ZNF597Q96LX8 424 aa13.42□□□□□ -0.26
PTPN7-216ENST00000492977 SEPHS2Q99611 448 aa13.42□□□□□ -0.26
PTPN7-216ENST00000492977 CIB1Q99828 191 aa13.42□□□□□ -0.26
PTPN7-216ENST00000492977 C9orf16Q9BUW7 83 aa13.42□□□□□ -0.26
PTPN7-216ENST00000492977 TPT1P8Q9HAU6 139 aa13.42□□□□□ -0.26
PTPN7-216ENST00000492977 DCAF13Q9NV06 445 aaKnown RBP13.42□□□□□ -0.26
PTPN7-216ENST00000492977 OLAHQ9NV23 265 aa13.42□□□□□ -0.26
PTPN7-216ENST00000492977 ZNF624Q9P2J8 865 aaPredicted RBP13.42□□□□□ -0.26
PTPN7-216ENST00000492977 PNMA8BQ9ULN7 279 aaPredicted RBP13.42□□□□□ -0.26
PTPN7-216ENST00000492977 PCDHGB4Q9UN71 923 aa13.42□□□□□ -0.26
PTPN7-216ENST00000492977 SNX7Q9UNH6 387 aa13.42□□□□□ -0.26
PTPN7-216ENST00000492977 NUP214P35658 2090 aaPredicted RBP13.42□□□□□ -0.26
PTPN7-216ENST00000492977 NDUFS4O43181 175 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 TPST1O60507 370 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 LDLRP01130 860 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 ABCB1P08183 1280 aaPredicted RBP13.41□□□□□ -0.26
PTPN7-216ENST00000492977 IL3P08700 152 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 CHRM5P08912 532 aaPredicted RBP13.41□□□□□ -0.26
PTPN7-216ENST00000492977 PEBP1P30086 187 aaKnown RBP13.41□□□□□ -0.26
PTPN7-216ENST00000492977 AHRP35869 848 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 SLC19A1P41440 591 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 ARFIP1P53367 373 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 MAPK12P53778 367 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 TRA2BP62995 288 aaKnown RBP13.41□□□□□ -0.26
PTPN7-216ENST00000492977 MC1RQ01726 317 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 ZIC1Q15915 447 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 TMTC4Q5T4D3 741 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 PTCRAQ6ISU1 281 aaPredicted RBP13.41□□□□□ -0.26
PTPN7-216ENST00000492977 FKBP9P1Q75LS8 142 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 NRROSQ86YC3 692 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 EID3Q8N140 333 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 C10orf111Q8N326 155 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 OR4E2Q8NGC2 313 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 OR4A15Q8NGL6 344 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 GPBAR1Q8TDU6 330 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 ZFP90Q8TF47 636 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 DPH7Q9BTV6 452 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 BDH2Q9BUT1 245 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 MAGIXQ9H6Y5 334 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 SLC6A20Q9NP91 592 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 AASDHPPTQ9NRN7 309 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 KLF15Q9UIH9 416 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 CA14Q9ULX7 337 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 TXNDC9O14530 226 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 KCNK5O95279 499 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 DDCP20711 480 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 SLC14A1Q13336 389 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 HEPACAMQ14CZ8 416 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 VMACQ2NL98 169 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 ZCCHC8Q6NZY4 707 aaKnown RBP13.41□□□□□ -0.26
PTPN7-216ENST00000492977 ZNF551Q7Z340 670 aaPredicted RBP13.41□□□□□ -0.26
PTPN7-216ENST00000492977 NUDT13Q86X67 352 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 MARVELD2Q8N4S9 558 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 TRIML2Q8N7C3 387 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 NETO1Q8TDF5 533 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 NCLNQ969V3 563 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 TM4SF18Q96CE8 201 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 ZNF764Q96H86 408 aaPredicted RBP13.41□□□□□ -0.26
PTPN7-216ENST00000492977 SLC29A1Q99808 456 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 SORBS1Q9BX66 1292 aaKnown RBP13.41□□□□□ -0.26
PTPN7-216ENST00000492977 OSBPL11Q9BXB4 747 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 GPR174Q9BXC1 333 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 TWSG1Q9GZX9 223 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 SRMSQ9H3Y6 488 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 DDX31Q9H8H2 851 aaKnown RBP13.41□□□□□ -0.26
PTPN7-216ENST00000492977 MIEF1Q9NQG6 463 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 GPR27Q9NS67 375 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 SPHK1Q9NYA1 384 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 PCDHGA2Q9Y5H1 932 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 AP4B1Q9Y6B7 739 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 AP1M2Q9Y6Q5 423 aa13.41□□□□□ -0.26
PTPN7-216ENST00000492977 LRP4O75096 1905 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 SPTBN5Q9NRC6 3674 aaKnown RBP13.4□□□□□ -0.26
PTPN7-216ENST00000492977 SPTY2D1-AS1A0A0U1RR47 76 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 A0A1W2PPC4 97 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 FAM149AA5PLN7 773 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 LRIT2A6NDA9 550 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 ISM1B1AKI9 464 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 SOX1O00570 391 aaPredicted RBP13.4□□□□□ -0.26
PTPN7-216ENST00000492977 CLOCKO15516 846 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 DEAF1O75398 565 aaPredicted RBP13.4□□□□□ -0.26
PTPN7-216ENST00000492977 CKMT2P17540 419 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 EFNA1P20827 205 aaPredicted RBP13.4□□□□□ -0.26
PTPN7-216ENST00000492977 BCL6P41182 706 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 HBA1P69905 142 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 KIR2DS3Q14952 304 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 PDK3Q15120 406 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 NRF1Q16656 503 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 PUS10Q3MIT2 529 aaKnown RBP13.4□□□□□ -0.26
PTPN7-216ENST00000492977 OR4C11Q6IEV9 310 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 ZNF425Q6IV72 752 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 IYDQ6PHW0 289 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 SPRED1Q7Z699 444 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 UBE3DQ7Z6J8 389 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 ZZZ3Q8IYH5 903 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 ADGRF3Q8IZF5 1079 aa13.4□□□□□ -0.26
PTPN7-216ENST00000492977 SLC22A18ASQ8N1D0 253 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms