RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 TGIF2Q9GZN2 237 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 SEMA3GQ9NS98 782 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 C14orf105Q9NVL8 296 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 ARGLU1Q9NWB6 273 aaPredicted RBP13.23□□□□□ -0.29
CCM2-217ENST00000492883 MAN2B2Q9Y2E5 1009 aa13.23□□□□□ -0.29
CCM2-217ENST00000492883 APC2O95996 2303 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 WDFY3Q8IZQ1 3526 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 GOLGA6L10A6NI86 522 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 CHST10O43529 356 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 BMP10O95393 424 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 TBX6O95947 436 aaPredicted RBP13.22□□□□□ -0.29
CCM2-217ENST00000492883 IGHEP01854 428 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 HEXBP07686 556 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 UMODP07911 640 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 CCR10P46092 362 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 NEK2P51955 445 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 NAGLUP54802 743 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 EMP2P54851 167 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 DNAJB13P59910 316 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 NAA20P61599 178 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 RPS13P62277 151 aaKnown RBP13.22□□□□□ -0.29
CCM2-217ENST00000492883 OLR1P78380 273 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 TRAF3Q13114 568 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 CASP8Q14790 479 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 TMEM35AQ53FP2 167 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 SGO1Q5FBB7 561 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 EXOC3L1Q86VI1 746 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 LAPTM4BQ86VI4 370 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 TMEM151BQ8IW70 566 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 ZC3H7AQ8IWR0 971 aaKnown RBP13.22□□□□□ -0.29
CCM2-217ENST00000492883 SRFBP1Q8NEF9 429 aaKnown RBP13.22□□□□□ -0.29
CCM2-217ENST00000492883 MYRIPQ8NFW9 859 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 OR5T3Q8NGG3 340 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 ADAMTS17Q8TE56 1095 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 APOBEC4Q8WW27 367 aaKnown RBP13.22□□□□□ -0.29
CCM2-217ENST00000492883 PGM2Q96G03 612 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 PEX11GQ96HA9 241 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 IP6K3Q96PC2 410 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 CENPKQ9BS16 269 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 MS4A8Q9BY19 250 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 AICDAQ9GZX7 198 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 STMN4Q9H169 189 aaPredicted RBP13.22□□□□□ -0.29
CCM2-217ENST00000492883 OR51B5Q9H339 312 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 ELOVL6Q9H5J4 265 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 COPS7BQ9H9Q2 264 aaPredicted RBP13.22□□□□□ -0.29
CCM2-217ENST00000492883 CLK4Q9HAZ1 481 aaKnown RBP13.22□□□□□ -0.29
CCM2-217ENST00000492883 OXSMQ9NWU1 459 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 SLC17A7Q9P2U7 560 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 C3orf18Q9UK00 162 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 STK38LQ9Y2H1 464 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 TSC22D4Q9Y3Q8 395 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 ACACBO00763 2458 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 ASPMQ8IZT6 3477 aa13.22□□□□□ -0.29
CCM2-217ENST00000492883 A0A1B0GTL3 188 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 ARGFXA6NJG6 315 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 MAGEB17A8MXT2 336 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 PSMD12O00232 456 aaPredicted RBP13.21□□□□□ -0.29
CCM2-217ENST00000492883 SAP18O00422 153 aaKnown RBP13.21□□□□□ -0.29
CCM2-217ENST00000492883 B3GALT2O43825 422 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 TRIM13O60858 407 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 DNAJB6O75190 326 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 OR4F21O95013 312 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 IL10P22301 178 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 MMP11P24347 488 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 PTX3P26022 381 aaPredicted RBP13.21□□□□□ -0.29
CCM2-217ENST00000492883 ASPHQ12797 758 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 LCP2Q13094 533 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 IFT88Q13099 833 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 AP5B1Q2VPB7 878 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 ADPRMQ3LIE5 342 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 MINDY4Q4G0A6 757 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 GGTA1PQ4G0N0 100 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 DEPDC1Q5TB30 811 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 KHDRBS2Q5VWX1 349 aaKnown RBP13.21□□□□□ -0.29
CCM2-217ENST00000492883 LIPMQ5VYY2 423 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 FRG2Q64ET8 278 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 LETMD1Q6P1Q0 360 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 ABHD17CQ6PCB6 329 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 GPRIN3Q6ZVF9 776 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 C10orf107Q8IVU9 208 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 RNF175Q8N4F7 328 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 WDR20Q8TBZ3 569 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 NACC2Q96BF6 587 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 VPS50Q96JG6 964 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 KCNC2Q96PR1 638 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 FRG2BQ96QU4 278 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 ZNF382Q96SR6 550 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 ROGDIQ9GZN7 287 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 DMRT3Q9NQL9 472 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 TRPS1Q9UHF7 1281 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 MKL2Q9ULH7 1088 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 SNX6Q9UNH7 406 aa13.21□□□□□ -0.29
CCM2-217ENST00000492883 IGF2RP11717 2491 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 IDSB3KWA1 339 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 C4orf51C9J302 202 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 ERVH48-1M5A8F1 160 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 FOXE1O00358 373 aaPredicted RBP13.2□□□□□ -0.3
CCM2-217ENST00000492883 TYROBPO43914 113 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 JRKO75564 520 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 ALDH3A1P30838 453 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms