RNA–Protein interactions for RNA: ENST00000492407.1

HDAC3-212, Transcript of histone deacetylase 3, humanhuman

TSL 5

Gene HDAC3, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-212ENST00000492407 IL2P60568 153 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 DHX9Q08211 1270 aaKnown RBP8.58□□□□□ -1.04
HDAC3-212ENST00000492407 NAE1Q13564 534 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 ABRAXAS2Q15018 415 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 TAF11Q15544 211 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 TRIP13Q15645 432 aaPredicted RBP8.58□□□□□ -1.04
HDAC3-212ENST00000492407 HSP90AA5PQ58FG0 334 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 TTC27Q6P3X3 843 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 CCDC137Q6PK04 289 aaKnown RBP8.58□□□□□ -1.04
HDAC3-212ENST00000492407 QSOX2Q6ZRP7 698 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 ABHD13Q7L211 337 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 PRSS41Q7RTY9 318 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 RPS19BP1Q86WX3 136 aaKnown RBP8.58□□□□□ -1.04
HDAC3-212ENST00000492407 PDSS2Q86YH6 399 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 SIAH3Q8IW03 269 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 GHDCQ8N2G8 530 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 KCT2Q8NC54 265 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 TRPV3Q8NET8 790 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 ADAMTS18Q8TE60 1221 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 SNF8Q96H20 258 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 SEC16BQ96JE7 1060 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 SIGLEC12Q96PQ1 595 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 SH3GL1Q99961 368 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 ABCF3Q9NUQ8 709 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 MKS1Q9NXB0 559 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 HCN3Q9P1Z3 774 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 LRFN1Q9P244 771 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 ZFP69BQ9UJL9 534 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 MEMO1Q9Y316 297 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 CNTRLQ7Z7A1 2325 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 CROCCQ5TZA2 2017 aa8.58□□□□□ -1.04
HDAC3-212ENST00000492407 IGHV3-20A0A0C4DH32 117 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 GABRR3A8MPY1 467 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 E9PLN8 166 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 CES2O00748 559 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 NDC80O14777 642 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 NME2P1O60361 137 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 RDH16O75452 317 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 NEURL1O76050 574 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 CDH1P12830 882 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 NME2P22392 152 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 GSTM2P28161 218 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 GRNP28799 593 aaKnown RBP8.57□□□□□ -1.04
HDAC3-212ENST00000492407 CXCR5P32302 372 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 CYB561P49447 251 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 VPS41P49754 854 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 SNRPNP63162 240 aaKnown RBP8.57□□□□□ -1.04
HDAC3-212ENST00000492407 ADORA2A-AS1P86434 159 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 TIAL1Q01085 375 aaKnown RBP eCLIP8.57□□□□□ -1.04
HDAC3-212ENST00000492407 RGS1Q08116 209 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 FRG1Q14331 258 aaKnown RBP8.57□□□□□ -1.04
HDAC3-212ENST00000492407 CRYMQ14894 314 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 C3AR1Q16581 482 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 SPANXN3Q5MJ09 141 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 SPINK14Q6IE38 97 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 PAQR3Q6TCH7 311 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 CCBE1Q6UXH8 406 aaPredicted RBP8.57□□□□□ -1.04
HDAC3-212ENST00000492407 LRRC8AQ8IWT6 810 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 AGGF1Q8N302 714 aaeCLIP8.57□□□□□ -1.04
HDAC3-212ENST00000492407 ACBD4Q8NC06 268 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 C7orf57Q8NEG2 295 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 ACTRT1Q8TDG2 376 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 FBXL8Q96CD0 374 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 MTFMTQ96DP5 389 aaKnown RBP8.57□□□□□ -1.04
HDAC3-212ENST00000492407 C14orf79Q96F83 325 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 LURAP1Q96LR2 239 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 FRMD6Q96NE9 622 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 NPAS2Q99743 824 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 VKORC1Q9BQB6 163 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 SLC39A3Q9BRY0 314 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 ATG10Q9H0Y0 220 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 PELI2Q9HAT8 420 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 IARS2Q9NSE4 1012 aaKnown RBP8.57□□□□□ -1.04
HDAC3-212ENST00000492407 ARL15Q9NXU5 204 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 ADAMTS6Q9UKP5 1117 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 PPIEQ9UNP9 301 aaKnown RBP8.57□□□□□ -1.04
HDAC3-212ENST00000492407 CSMD1Q96PZ7 3565 aa8.57□□□□□ -1.04
HDAC3-212ENST00000492407 IGKV3D-11A0A0A0MRZ8 115 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 GOLGA6L10A0A0M3HER8 536 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 TCRBV16S1A1N1A0A5B0 115 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 FEZF1A0PJY2 475 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 SAGE2PA6NJ88 616 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 NPIPA5E9PKD4 350 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 KLRC4-KLRK1H3BQV0 150 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 GOLGA8MH3BSY2 632 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 BOLA2-SMG1P6H3BVE0 249 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 PGRMC1O00264 195 aaKnown RBP8.56□□□□□ -1.04
HDAC3-212ENST00000492407 FCHO1O14526 889 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 PRRG2O14669 202 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 NDUFS4O43181 175 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 CHST10O43529 356 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 OR1F1O43749 312 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 PRMT3O60678 531 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 SLC25A12O75746 678 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 TSPAN12O95859 305 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 AHSGP02765 367 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 SMIM10L1P0DMW3 83 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 GABRB3P28472 473 aa8.56□□□□□ -1.04
HDAC3-212ENST00000492407 TPP2P29144 1249 aaPredicted RBP8.56□□□□□ -1.04
HDAC3-212ENST00000492407 HPDP32754 393 aaPredicted RBP8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms