RNA–Protein interactions for RNA: ENST00000491987.1

TOM1-215, Transcript of target of myb1 membrane trafficking protein, humanhuman

TSL 5

Gene TOM1, Length 852 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1-215ENST00000491987 CLGNO14967 610 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 PRAMEF4O60810 478 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 STK16O75716 305 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 S100BP04271 92 aaPredicted RBP14.1□□□□□ -0.15
TOM1-215ENST00000491987 SLC35E2BP0CK96 405 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 SMIM10L1P0DMW3 83 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 GP1BBP13224 206 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 TFEBP19484 476 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 HNRNPH1P31943 449 aaKnown RBP14.1□□□□□ -0.15
TOM1-215ENST00000491987 OR4D2P58180 307 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 STXBP1P61764 594 aaKnown RBP14.1□□□□□ -0.15
TOM1-215ENST00000491987 EXT1Q16394 746 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 PDK4Q16654 411 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 XKR6Q5GH73 641 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 CDKL4Q5MAI5 379 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 PRAMEF9Q5VWM5 478 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 FCRLBQ6BAA4 426 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 RPUSD3Q6P087 351 aaKnown RBP14.1□□□□□ -0.15
TOM1-215ENST00000491987 FAM180AQ6UWF9 173 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 TBC1D1Q86TI0 1168 aaPredicted RBP14.1□□□□□ -0.15
TOM1-215ENST00000491987 KRT78Q8N1N4 520 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 CA13Q8N1Q1 262 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 PDPRQ8NCN5 879 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 SSC4DQ8WTU2 575 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 FAR1Q8WVX9 515 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 ZNF592Q92610 1267 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 GAL3ST3Q96A11 431 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 KIAA1191Q96A73 305 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 SMIM10Q96HG1 83 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 LPAR4Q99677 370 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 RNF32Q9H0A6 362 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 TEKT2Q9UIF3 430 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 LRRK2Q5S007 2527 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 CPAMD8Q8IZJ3 1885 aa14.1□□□□□ -0.15
TOM1-215ENST00000491987 OR5H15A6NDH6 313 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 FAM227AF5H4B4 570 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 PSMD12O00232 456 aaPredicted RBP14.09□□□□□ -0.15
TOM1-215ENST00000491987 CCNT2O60583 730 aaKnown RBP14.09□□□□□ -0.15
TOM1-215ENST00000491987 RNH1P13489 461 aaKnown RBP14.09□□□□□ -0.15
TOM1-215ENST00000491987 CRABP2P29373 138 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 KCNC1P48547 511 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 BTN3A2P78410 334 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 BTG2P78543 158 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 BMPR2Q13873 1038 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 WHAMMP3Q1A5X7 153 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 ADNP2Q6IQ32 1131 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 QSOX2Q6ZRP7 698 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 CYP4X1Q8N118 509 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 BEST3Q8N1M1 668 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 ST6GALNAC3Q8NDV1 305 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 TTLQ8NG68 377 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 STAG3L4Q8TBR4 150 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 M1APQ8TC57 530 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 MS4A6EQ96DS6 147 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 FAR2Q96K12 515 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 ZNF354BQ96LW1 612 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 PTCHD1Q96NR3 888 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 EHD1Q9H4M9 534 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 NT5DC2Q9H857 520 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 CLK4Q9HAZ1 481 aaKnown RBP14.09□□□□□ -0.15
TOM1-215ENST00000491987 NMRAL1Q9HBL8 299 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 IGSF5Q9NSI5 407 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 STMN3Q9NZ72 180 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 COPG2Q9UBF2 871 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 ERRFI1Q9UJM3 462 aaPredicted RBP14.09□□□□□ -0.15
TOM1-215ENST00000491987 PTBP2Q9UKA9 531 aaKnown RBP14.09□□□□□ -0.15
TOM1-215ENST00000491987 ASB1Q9Y576 335 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 COL12A1Q99715 3063 aa14.09□□□□□ -0.15
TOM1-215ENST00000491987 USP9XQ93008 2570 aaPredicted RBP14.08□□□□□ -0.16
TOM1-215ENST00000491987 ANKDD1BA6NHY2 528 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 SUPT3HB4E1H0 165 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 ERI3O43414 337 aaKnown RBP14.08□□□□□ -0.16
TOM1-215ENST00000491987 PRMT3O60678 531 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 SUPT3HO75486 399 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 EDN3P14138 238 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 EPORP19235 508 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 CD22P20273 847 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 MAOAP21397 527 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 GSTM2P28161 218 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 ST13P50502 369 aaKnown RBP14.08□□□□□ -0.16
TOM1-215ENST00000491987 SLC26A5P58743 744 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 IRF9Q00978 393 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 DOC2AQ14183 400 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 UAP1Q16222 522 aaPredicted RBP14.08□□□□□ -0.16
TOM1-215ENST00000491987 ACER2Q5QJU3 275 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 UBAP2Q5T6F2 1119 aaKnown RBP14.08□□□□□ -0.16
TOM1-215ENST00000491987 H3F3CQ6NXT2 135 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 VN1R5Q7Z5H4 357 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 ISCA2Q86U28 154 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 CRLF3Q8IUI8 442 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 BCORP1Q8N888 145 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 SUN3Q8TAQ9 357 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 KCTD4Q8WVF5 259 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 NXNL1Q96CM4 212 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 PTCD3Q96EY7 689 aaKnown RBP14.08□□□□□ -0.16
TOM1-215ENST00000491987 TAAR6Q96RI8 345 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 CD244Q9BZW8 370 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 MMP25Q9NPA2 562 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 OLAHQ9NV23 265 aa14.08□□□□□ -0.16
TOM1-215ENST00000491987 NINJ2Q9NZG7 142 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms