RNA–Protein interactions for RNA: ENST00000491833.5

SSR4-212, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-212ENST00000491833 CYP4X1Q8N118 509 aa13.52□□□□□ -0.25
SSR4-212ENST00000491833 ZFP62Q8NB50 900 aaPredicted RBP13.52□□□□□ -0.25
SSR4-212ENST00000491833 OR5M3Q8NGP4 307 aa13.52□□□□□ -0.25
SSR4-212ENST00000491833 KCNJ9Q92806 393 aa13.52□□□□□ -0.25
SSR4-212ENST00000491833 CCDC138Q96M89 665 aa13.52□□□□□ -0.25
SSR4-212ENST00000491833 DEFB126Q9BYW3 111 aa13.52□□□□□ -0.25
SSR4-212ENST00000491833 CCDC68Q9H2F9 335 aa13.52□□□□□ -0.25
SSR4-212ENST00000491833 KLHL42Q9P2K6 505 aa13.52□□□□□ -0.25
SSR4-212ENST00000491833 SH2B3Q9UQQ2 575 aa13.52□□□□□ -0.25
SSR4-212ENST00000491833 SPG11Q96JI7 2443 aa13.51□□□□□ -0.25
SSR4-212ENST00000491833 ABCA2Q9BZC7 2435 aa13.51□□□□□ -0.25
SSR4-212ENST00000491833 FAM237BA0A1B0GVD1 139 aa13.51□□□□□ -0.25
SSR4-212ENST00000491833 NDUFS4O43181 175 aa13.51□□□□□ -0.25
SSR4-212ENST00000491833 GALR3O60755 368 aaPredicted RBP13.51□□□□□ -0.25
SSR4-212ENST00000491833 ZSCAN5DPP0CG00 497 aa13.51□□□□□ -0.25
SSR4-212ENST00000491833 RPL22P35268 128 aaKnown RBP13.51□□□□□ -0.25
SSR4-212ENST00000491833 KCNJ1P48048 391 aa13.51□□□□□ -0.25
SSR4-212ENST00000491833 VPS41P49754 854 aa13.51□□□□□ -0.25
SSR4-212ENST00000491833 GPR85P60893 370 aa13.51□□□□□ -0.25
SSR4-212ENST00000491833 MEF2AQ02078 507 aaPredicted RBP13.51□□□□□ -0.25
SSR4-212ENST00000491833 PMPCAQ10713 525 aa13.51□□□□□ -0.25
SSR4-212ENST00000491833 ZNF470Q6ECI4 717 aa13.51□□□□□ -0.25
SSR4-212ENST00000491833 PAOXQ6QHF9 649 aa13.51□□□□□ -0.25
SSR4-212ENST00000491833 ARMC10Q8N2F6 343 aa13.51□□□□□ -0.25
SSR4-212ENST00000491833 AFAP1L2Q8N4X5 818 aa13.51□□□□□ -0.25
SSR4-212ENST00000491833 TMEM156Q8N614 296 aa13.51□□□□□ -0.25
SSR4-212ENST00000491833 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.51□□□□□ -0.25
SSR4-212ENST00000491833 ZNF740Q8NDX6 193 aa13.51□□□□□ -0.25
SSR4-212ENST00000491833 MYRIPQ8NFW9 859 aa13.51□□□□□ -0.25
SSR4-212ENST00000491833 PTCHD1Q96NR3 888 aa13.51□□□□□ -0.25
SSR4-212ENST00000491833 SLC6A16Q9GZN6 736 aa13.51□□□□□ -0.25
SSR4-212ENST00000491833 DNAJB12Q9NXW2 375 aaKnown RBP13.51□□□□□ -0.25
SSR4-212ENST00000491833 NAV3Q8IVL0 2385 aa13.51□□□□□ -0.25
SSR4-212ENST00000491833 ACOT7O00154 380 aa13.5□□□□□ -0.25
SSR4-212ENST00000491833 LCMT2O60294 686 aaKnown RBP13.5□□□□□ -0.25
SSR4-212ENST00000491833 B4GALT2O60909 372 aa13.5□□□□□ -0.25
SSR4-212ENST00000491833 KRT14P02533 472 aa13.5□□□□□ -0.25
SSR4-212ENST00000491833 CDH1P12830 882 aa13.5□□□□□ -0.25
SSR4-212ENST00000491833 ALOX12P18054 663 aa13.5□□□□□ -0.25
SSR4-212ENST00000491833 CCND1P24385 295 aa13.5□□□□□ -0.25
SSR4-212ENST00000491833 OLR1P78380 273 aa13.5□□□□□ -0.25
SSR4-212ENST00000491833 CEBPEQ15744 281 aa13.5□□□□□ -0.25
SSR4-212ENST00000491833 CYP1B1Q16678 543 aa13.5□□□□□ -0.25
SSR4-212ENST00000491833 WHAMMP3Q1A5X7 153 aa13.5□□□□□ -0.25
SSR4-212ENST00000491833 DEFB134Q4QY38 66 aa13.5□□□□□ -0.25
SSR4-212ENST00000491833 EMC4Q5J8M3 183 aa13.5□□□□□ -0.25
SSR4-212ENST00000491833 NEPROQ6NW34 567 aa13.5□□□□□ -0.25
SSR4-212ENST00000491833 LCTLQ6UWM7 567 aa13.5□□□□□ -0.25
SSR4-212ENST00000491833 PIWIL4Q7Z3Z4 852 aaKnown RBP13.5□□□□□ -0.25
SSR4-212ENST00000491833 CREG2Q8IUH2 290 aa13.5□□□□□ -0.25
SSR4-212ENST00000491833 MFSD9Q8NBP5 474 aa13.5□□□□□ -0.25
SSR4-212ENST00000491833 MNS1Q8NEH6 495 aa13.5□□□□□ -0.25
SSR4-212ENST00000491833 OR52N2Q8NGI0 321 aa13.5□□□□□ -0.25
SSR4-212ENST00000491833 POLDIP3Q9BY77 421 aaKnown RBP13.5□□□□□ -0.25
SSR4-212ENST00000491833 DDX47Q9H0S4 455 aaKnown RBP13.5□□□□□ -0.25
SSR4-212ENST00000491833 TIMMDC1Q9NPL8 285 aa13.5□□□□□ -0.25
SSR4-212ENST00000491833 ASIC3Q9UHC3 531 aa13.5□□□□□ -0.25
SSR4-212ENST00000491833 ST6GALNAC2Q9UJ37 374 aa13.5□□□□□ -0.25
SSR4-212ENST00000491833 PHF3Q92576 2039 aaKnown RBP13.5□□□□□ -0.25
SSR4-212ENST00000491833 TRBV11-1A0A0K0K1C0 115 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 TCRBV16S1A1N1A0A5B0 115 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 TMEM200CA6NKL6 621 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 FIGNL2A6NMB9 653 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 EIF3FO00303 357 aaPredicted RBP13.49□□□□□ -0.25
SSR4-212ENST00000491833 CHST10O43529 356 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 ITGA10O75578 1167 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 PDE9AO76083 593 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 TPSB2P20231 275 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 CLCN2P51788 898 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 DR1Q01658 176 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 RGS1Q08116 209 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 C2orf54Q08AI8 447 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 FOXD4Q12950 439 aaPredicted RBP13.49□□□□□ -0.25
SSR4-212ENST00000491833 TRIP13Q15645 432 aaPredicted RBP13.49□□□□□ -0.25
SSR4-212ENST00000491833 TPSAB1Q15661 275 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 LRRC8EQ6NSJ5 796 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 AGTRAPQ6RW13 159 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 CYHR1Q6ZMK1 362 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 ABHD13Q7L211 337 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 CPNE9Q8IYJ1 553 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 APCDD1LQ8NCL9 501 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 ARMC2Q8NEN0 867 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 NFAM1Q8NET5 270 aaPredicted RBP13.49□□□□□ -0.25
SSR4-212ENST00000491833 OR10Q1Q8NGQ4 319 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 CD200R1Q8TD46 325 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 ALKBH8Q96BT7 664 aaKnown RBP13.49□□□□□ -0.25
SSR4-212ENST00000491833 RMND5BQ96G75 393 aaPredicted RBP13.49□□□□□ -0.25
SSR4-212ENST00000491833 GPR21Q99679 349 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 FBXO6Q9NRD1 293 aaPredicted RBP13.49□□□□□ -0.25
SSR4-212ENST00000491833 FBXW2Q9UKT8 454 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 MED16Q9Y2X0 877 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 DHRS7Q9Y394 339 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 L3MBTL1Q9Y468 752 aa13.49□□□□□ -0.25
SSR4-212ENST00000491833 PRRC2AP48634 2157 aaKnown RBP13.49□□□□□ -0.25
SSR4-212ENST00000491833 IGKV3D-11A0A0A0MRZ8 115 aa13.48□□□□□ -0.25
SSR4-212ENST00000491833 A8MUA0 341 aa13.48□□□□□ -0.25
SSR4-212ENST00000491833 NPIPA2E9PIF3 369 aa13.48□□□□□ -0.25
SSR4-212ENST00000491833 NPIPA3F8WFD2 350 aa13.48□□□□□ -0.25
SSR4-212ENST00000491833 PSMD12O00232 456 aaPredicted RBP13.48□□□□□ -0.25
SSR4-212ENST00000491833 SERPIND1P05546 499 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms